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VDJ-Seq: Deep Sequencing Analysis of Rearranged Immunoglobulin Heavy Chain Gene to Reveal Clonal Evolution Patterns of B Cell Lymphoma
Published on: December 28, 2015
Molecular profiling of diffuse large B-cell lymphoma identifies robust subtypes including one characterized by host
Stefano Monti1, Kerry J Savage, Jeffery L Kutok
1The Broad Institute, Cambridge, MA, USA.
Blood
|November 20, 2004
Summary
Diffuse large B-cell lymphoma (DLBCL) can be classified into three subtypes: oxidative phosphorylation, B-cell receptor/proliferation, and host response (HR). The HR subtype is characterized by distinct tumor microenvironment and inflammatory features, suggesting targeted therapies.
Area of Science:
- Hematology
- Oncology
- Immunology
Background:
- Diffuse large B-cell lymphoma (DLBCL) is a heterogeneous lymphoid malignancy with variable clinical outcomes.
- Transcriptional profiling has previously identified DLBCL subtypes linked to B-cell origin and patient prognosis.
Purpose of the Study:
- To identify robust and reproducible molecular subtypes of DLBCL using comprehensive transcriptional signatures.
- To investigate the role of the tumor microenvironment and host inflammatory response in DLBCL pathogenesis.
Main Methods:
- Analysis of a large series of newly diagnosed DLBCLs using whole genome arrays and multiple clustering techniques.
- Gene set enrichment analysis to characterize DLBCL subsets.
- Confirmation of identified subtypes in an independent patient cohort.
Main Results:
- Three distinct DLBCL subtypes were identified: "oxidative phosphorylation," "B-cell receptor/proliferation," and "host response" (HR).
- The HR subtype exhibited increased expression of immune-related genes, including T/NK cell receptors, complement components, and inflammatory mediators.
- HR DLBCLs showed significantly higher infiltration of specific immune cells, such as CD2+/CD3+ lymphocytes and S100+/GILT+ dendritic cells.
- The HR cluster shared characteristics with T-cell/histiocyte-rich B-cell lymphoma, including fewer genetic abnormalities and frequent organ involvement.
Conclusions:
- The tumor microenvironment and host inflammatory response are critical defining features of specific DLBCL subsets.
- The identification of the HR subtype suggests potential for targeted therapeutic strategies based on immune and inflammatory profiles in DLBCL.

