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Assays for the Specific Growth Rate and Cell-binding Ability of Rotavirus
Published on: January 28, 2019
Rotavirus RNA electropherotype in different states in Malaysia for the year 2000 and 2001
H Zuridah1, A R Bahaman, M L Mohd Azmi
1Pathology Laboratory, Hospital Umum Sarawak, Kuching, Selangor.
Abstract:
A total of 157 stool samples were examined for Group A rotaviruses in diarrheic children admitted to 8 different major hospitals in Malaysia. The overall incidence rate in this study was 19.7% (31 of 157) with a variation of 9.5% to 39.1% in different locations. Majority of the infections detected were in those under 2 years of age and there were fewer admissions in the older age group. The stool samples were initially screened for rotavirus Group A by latex agglutination method and followed by RNA electrophoresis. The size and the characteristics wheel-shaped morphology of the viral preparations when examined by electron-microscopy further confirmed the presence of rotaviruses in the positive stool samples. Analysis of the RNA pattern showed that majority of the isolates, 51.6% (16 of 31) were Type IIC ('long' with comigration of RNA segments 7 and 8), 35.5% (11 of 31) with Type IIG ('long' with comigration of segments 7, 8, 9), 9.7% (3 of 31) with Type IG ('short' with comigration of RNA segments 7, 8, 9) and 3.2% (1 of 31) of mixed or atypical pattern. It appeared that over a 12 year interval, only one new or unusual rotavirus electropherotype was found. This is the first comprehensive report on the electropherotypes of rotaviruses covering eight different geographical locations in Malaysia and the data obtained is useful for understanding the geographic distribution and types of rotaviruses transmitting in Malaysia.
Insights
Group A rotavirus infections were detected in 19.7% of diarrheic children in Malaysia, predominantly in those under two years old. This study details the rotavirus electropherotypes found across eight Malaysian hospitals.
Area of Science:
- Virology
- Pediatric Infectious Diseases
- Public Health
Background:
- Group A rotaviruses are a leading cause of severe diarrheal disease in young children globally.
- Understanding the genetic diversity and geographic distribution of rotavirus strains is crucial for vaccine development and public health strategies.
Purpose of the Study:
- To determine the incidence and electropherotype distribution of Group A rotaviruses in diarrheic children across eight Malaysian hospitals.
- To provide comprehensive data on rotavirus epidemiology in Malaysia.
Main Methods:
- Stool samples from 157 diarrheic children were screened for Group A rotavirus using latex agglutination.
- Positive samples were further analyzed by RNA electrophoresis and electron microscopy for confirmation and genotyping.
- Rotavirus electropherotypes were characterized based on RNA segment migration patterns.
Main Results:
- An overall incidence of 19.7% for Group A rotavirus was observed, with significant geographical variation (9.5%–39.1%).
- Infections were most common in children under two years of age.
- The predominant electropherotypes identified were Type IIC (51.6%) and Type IIG (35.5%), both characterized as 'long' patterns.
Conclusions:
- This study presents the first comprehensive report on rotavirus electropherotypes from multiple locations in Malaysia.
- The findings highlight the prevalence of specific rotavirus genotypes and their distribution, offering valuable insights for disease surveillance and control efforts in the region.
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