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Updated: Aug 13, 2026

Labeling F-actin Barbed Ends with Rhodamine-actin in Permeabilized Neuronal Growth Cones
Published on: March 17, 2011
Characterization of tetramethylrhodaminyl-phalloidin binding to cellular F-actin
M L Cano1, L Cassimeris, M Joyce
1Department of Chemical Engineering, University of Pennsylvania, Philadelphia 19104.
Abstract:
Fluorescent derivatives of phalloidin are widely used to measure filamentous actin (F-actin) levels and to stabilize F-actin. We have characterized the kinetics and affinity of binding of tetramethylrhodaminyl (TRITC)-phalloidin to rabbit skeletal muscle F-actin and to F-actin in lysates of rabbit polymorphonuclear leukocytes (PMNs). We have defined conditions where TRITC-phalloidin can be used to inhibit F-actin depolymerization and to quantify F-actin without prior fixation. By equilibrium measurements, the affinity of TRITC-phalloidin binding to rabbit skeletal muscle F-actin (pyrene labeled) or to PMN lysate F-actin was 1-4 x 10(-7) M. In both cases, the stoichiometry of binding was approximately 1:1. Kinetic measurements of TRITC-phalloidin binding to PMN lysate F-actin resulted in an association rate constant of 420 +/- 120 M-1 sec-1 and a dissociation rate constant of 8.3 +/- 0.9 x 10(-5) sec-1. The affinity calculated from the kinetic measurements (2 +/- 1 x 10(-7) M) agreed well with that obtained by equilibrium measurements. The rate with which 0.6 microM TRITC-phalloidin inhibited 0.1 microM pyrenyl F-actin depolymerization (90% inhibition in 10 sec) was much faster than the rate of binding to pyrenyl F-actin (less than 1% bound in 10 sec), suggesting that phalloidin binds to filament ends more rapidly than to the rest of the filament. We show that TRITC-phalloidin can be used to measure F-actin levels in cell lysates when G-actin is also present (i.e., in cell lysates at high concentrations) if DNase I is included to prevent phalloidin-induced polymerization.
Insights
Tetramethylrhodaminyl (TRITC)-phalloidin binds filamentous actin (F-actin) with high affinity and can quantify F-actin without fixation. Conditions were defined for using TRITC-phalloidin to measure F-actin in cell lysates, even with G-actin present.
Area of Science:
- Biochemistry
- Cell Biology
Background:
- Fluorescent phalloidin derivatives are essential tools for studying filamentous actin (F-actin) dynamics and levels.
- Tetramethylrhodaminyl (TRITC)-phalloidin is a commonly used fluorescent probe for F-actin.
Purpose of the Study:
- To characterize the binding kinetics and affinity of TRITC-phalloidin to F-actin from rabbit skeletal muscle and polymorphonuclear leukocytes (PMNs).
- To define conditions for using TRITC-phalloidin to inhibit F-actin depolymerization and quantify F-actin without prior fixation.
- To investigate the mechanism of phalloidin binding to F-actin.
Main Methods:
- Equilibrium binding measurements to determine affinity and stoichiometry.
- Kinetic measurements to determine association and dissociation rate constants.
- Depolymerization inhibition assays to assess phalloidin's effect on F-actin stability.
Main Results:
- TRITC-phalloidin exhibited high affinity (1-4 x 10(-7) M) and a 1:1 binding stoichiometry to F-actin.
- Kinetic data confirmed the high affinity and revealed specific rate constants for binding.
- Phalloidin rapidly inhibited F-actin depolymerization, suggesting preferential binding to filament ends.
Conclusions:
- TRITC-phalloidin is a reliable tool for quantifying F-actin in various biological samples, including cell lysates containing monomeric actin (G-actin), when DNase I is used.
- The study provides a detailed kinetic and thermodynamic characterization of TRITC-phalloidin binding to F-actin.
- Understanding phalloidin's binding kinetics is crucial for its accurate application in F-actin measurements.
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