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Updated: Aug 20, 2026

Detection of Abnormal Prion Protein by Immunohistochemistry
Published on: May 5, 2023
Concealment of epitope by reduction and alkylation in prion protein
Jue Yuan1, Michael Kinter, John McGeehan
1Institute of Pathology, Case Western Reserve University, 2085 Adelbert Road, Cleveland, OH 44106, USA.
Abstract:
Conversion of the cellular prion protein (PrP(C)) into its pathological isoform (PrP(Sc)), the key molecular event in the pathogenesis of prion diseases, is accompanied by a conformational transition of alpha-helix into beta-sheet structures involving alpha-helix 1 (alpha1) domain from residues 144 to 154 of the protein. Reduction and alkylation of PrP(C) have been found to inhibit the conversion of PrP(C) into PrP(Sc) in vitro. Here we report that while antibody affinity of epitopes in the N- and C-terminal domains remained unchanged, reduction and alkylation of the PrP molecule induced complete concealment of an epitope in alpha1 for anti-PrP antibody 6H4 that is able to cure prion infection in the cell model. Mass spectrometric analysis of recombinant PrP showed that the alkylation reaction takes place at reduced cysteines but no modification was observed in this cryptic epitope. Our study suggests that reduction and alkylation result in local or global rearrangement of PrP tertiary structure that is maintained in both liquid and solid phases. The implications in the conversion of PrP(C) into PrP(Sc) and the therapeutics of prion diseases are discussed.
Insights
Reducing and alkylating the prion protein (PrP) conceals a key epitope, inhibiting its conversion to the pathological form (PrPSc). This structural change offers potential therapeutic strategies for prion diseases.
Area of Science:
- Neuroscience
- Biochemistry
- Molecular Biology
Background:
- Prion diseases involve the conversion of cellular prion protein (PrPC) to a pathological isoform (PrPSc).
- This conversion is characterized by a conformational change from alpha-helix to beta-sheet structures, particularly in the alpha1 domain (residues 144-154).
- In vitro studies show that reducing and alkylating PrPC can inhibit PrPSc formation.
Purpose of the Study:
- To investigate the structural effects of reduction and alkylation on PrPC.
- To determine how these modifications impact the accessibility of specific epitopes, including those targeted by therapeutic antibodies.
- To explore the implications for prion disease pathogenesis and treatment.
Main Methods:
- Chemical modification of recombinant PrP through reduction and alkylation.
- Assessment of antibody epitope accessibility using antibody binding assays.
- Mass spectrometry to analyze alkylation sites.
- Evaluation of structural changes in both liquid and solid phases.
Main Results:
- Reduction and alkylation concealed a critical epitope within the alpha1 domain recognized by the therapeutic antibody 6H4.
- Antibody affinity for epitopes in the N- and C-terminal domains remained unaffected.
- Mass spectrometry confirmed alkylation occurred at cysteine residues without modifying the cryptic epitope.
- Structural rearrangements were observed in both liquid and solid states.
Conclusions:
- Reduction and alkylation induce significant tertiary structural rearrangements in PrP.
- These modifications effectively mask a therapeutically relevant epitope, potentially blocking PrPSc conversion.
- The findings suggest novel therapeutic avenues for prion diseases by targeting PrP structure.
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