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Updated: Aug 20, 2026

Genotyping of Staphylococcus aureus by Ribosomal Spacer PCR (RS-PCR)
Published on: November 4, 2016
Comparison of emm typing and ribotyping with three restriction enzymes to characterize clinical isolates of
Stella Z Doktor1, Jill M Beyer, Robert K Flamm
1Infectious Diseases Research, Abbott Laboratories, Abbott Park, IL 60064, USA. stella.z.doktor@abbott.com
Abstract:
A total of 336 Streptococcus pyogenes isolates recently recovered from patients with pharyngitis from 13 countries were characterized by emm typing and riboprinting using an automated Riboprinter (Dupont/Qualicon) based on the patterns produced by three restriction enzymes, EcoRI, PstI, and HindIII. Three enzymes were necessary to increase the discrimination of ribogroups formed by each enzyme. A total of 40 ribogroups and 38 emm sequences (not counting allelic variations) were identified. Multilocus sequence typing was performed on a sampling of the isolates, and those results were consistent with those of both emm typing and ribotyping. Correlations were observed among all three methods.
Insights
This study characterized Streptococcus pyogenes isolates from pharyngitis patients using emm typing and riboprinting. The methods revealed distinct bacterial groups, aiding in understanding pathogen diversity and epidemiology.
Area of Science:
- Microbiology
- Molecular Epidemiology
- Bacterial Typing
Background:
- Streptococcus pyogenes is a significant cause of pharyngitis globally.
- Accurate typing methods are crucial for tracking pathogen strains and understanding disease outbreaks.
Purpose of the Study:
- To characterize a collection of Streptococcus pyogenes isolates from pharyngitis patients.
- To evaluate the discriminatory power of emm typing and automated riboprinting for S. pyogenes.
Main Methods:
- emm typing and automated riboprinting using EcoRI, PstI, and HindIII restriction enzymes were performed on 336 S. pyogenes isolates.
- Multilocus sequence typing (MLST) was used for a subset of isolates to compare with other typing methods.
Main Results:
- A total of 40 distinct ribogroups and 38 emm sequence types were identified.
- Combining three restriction enzymes enhanced the discrimination of ribogroups.
- Results from emm typing, riboprinting, and MLST showed strong correlations.
Conclusions:
- Automated riboprinting, especially with multiple enzymes, is a valuable tool for characterizing S. pyogenes.
- emm typing and riboprinting are consistent and complementary methods for molecular epidemiology of S. pyogenes.
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