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Published on: May 19, 2016
Platelet-derived growth factor stimulates Src-dependent mRNA stabilization of specific early genes in fibroblasts
Paul A Bromann1, Hasan Korkaya, Craig P Webb
1Laboratory of Signal Regulation and Cancer, Van Andel Research Institute, 333 Bostwick NE, Grand Rapids, Michigan 49503, USA.
Abstract:
The Src family of protein-tyrosine kinases (SFKs) participates in a variety of signal transduction pathways, including promotion of cell growth, prevention of apoptosis, and regulation of cell interactions and motility. In particular, SFKs are required for the mitogenic response to platelet-derived growth factor (PDGF). However, it is not clear whether there is a discrete SFK-specific pathway leading to enhanced gene expression or whether SFKs act to generally enhance PDGF-stimulated gene expression. To examine this, we treated quiescent NIH3T3 cells with PDGF in the presence or absence of small molecule inhibitors of SFKs, phosphatidylinositol 3-kinase (PI3K), and MEK1/2. Global patterns of gene expression were analyzed by using Affymetrix Gene-Chip arrays, and data were validated by using reverse transcription-PCR and ribonuclease protection assay. We identified a discrete set of immediate early genes induced by PDGF and inhibited in the presence of the SFK-selective inhibitor SU6656. A subset of these SFK-dependent genes was induced by PDGF even in the presence of the MEK1/2 inhibitor U0126 or the PI3K inhibitor LY294002. By using ribonuclease protection assays and nuclear run-off assays, we further determined that PDGF did not stimulate the rate of transcription of these SFK-dependent immediate early genes but rather promoted mRNA stabilization. Our data suggest that PDGF regulates gene expression through an SFK-specific pathway that is distinct from the Ras-MAPK and PI3K pathways, and that SFKs signal gene expression by enhancing mRNA stability.
Insights
Platelet-derived growth factor (PDGF) utilizes a specific Src family kinase (SFK) pathway to regulate gene expression. This pathway enhances messenger RNA (mRNA) stability rather than transcription, distinct from PI3K and Ras-MAPK pathways.
Area of Science:
- Molecular Biology
- Cell Signaling
- Gene Expression Regulation
Background:
- Src family kinases (SFKs) are crucial in cell signaling pathways, influencing cell growth, apoptosis, and motility.
- SFKs are known to be essential for the mitogenic effects of platelet-derived growth factor (PDGF).
- The precise mechanism by which SFKs mediate PDGF-stimulated gene expression remains unclear, with uncertainty regarding a discrete pathway versus general enhancement.
Purpose of the Study:
- To investigate whether SFKs mediate PDGF-stimulated gene expression through a distinct pathway or a general enhancement mechanism.
- To identify specific genes regulated by SFKs in response to PDGF.
- To elucidate the role of SFKs, phosphatidylinositol 3-kinase (PI3K), and MEK1/2 in PDGF-induced gene expression.
Main Methods:
- Treatment of quiescent NIH3T3 cells with PDGF in the presence of small molecule inhibitors for SFKs (SU6656), PI3K (LY294002), and MEK1/2 (U0126).
- Global gene expression analysis using Affymetrix Gene-Chip arrays.
- Validation of gene expression data through reverse transcription-PCR and ribonuclease protection assays, including nuclear run-off assays.
Main Results:
- A specific set of immediate early genes was identified as being induced by PDGF and inhibited by the SFK inhibitor SU6656.
- A subset of these SFK-dependent genes was induced by PDGF independently of MEK1/2 or PI3K inhibition.
- PDGF was found to enhance mRNA stability rather than transcription rate for these SFK-dependent immediate early genes.
Conclusions:
- PDGF regulates gene expression via an SFK-specific pathway distinct from the Ras-MAPK and PI3K pathways.
- SFKs play a critical role in signaling gene expression by promoting mRNA stabilization in response to PDGF.
- This study clarifies a specific mechanism of SFK-mediated gene regulation in cellular responses to growth factors.
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