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Updated: Aug 2, 2026

Visualization of Recombinant DNA and Protein Complexes Using Atomic Force Microscopy
Published on: July 18, 2011
Combined AFM and confocal fluorescence microscope for applications in bio-nanotechnology
R Kassies1, K O van der Werf, A Lenferink
1BMTI Institute for Biomedical Technology, University of Twente, PO Box 217, 7500 AE Enschede, The Netherlands.
We developed a novel atomic force fluorescence microscope (AFFM) for simultaneous high-resolution imaging and chemical identification. This instrument offers single-molecule sensitivity across a broad spectral range, enhancing material and biological sample analysis.
Area of Science:
- Advanced microscopy techniques
- Surface science and nanotechnology
- Biophysics and spectroscopy
Background:
- Atomic force microscopy (AFM) provides high-resolution topographical data.
- Confocal fluorescence microscopy enables chemical identification but lacks topographic detail.
- Simultaneous optical and topographic measurements are crucial for complex sample analysis.
Purpose of the Study:
- To develop and demonstrate a custom-designed atomic force fluorescence microscope (AFFM).
- To achieve simultaneous optical and topographic measurements with single-molecule sensitivity.
- To enhance the discrimination of spectroscopically distinct objects through combined imaging.
Main Methods:
- Integration of atomic force microscopy (AFM) and confocal fluorescence microscopy.
- Incorporation of a spectrograph for fluorescence spectral imaging.
- Modular design enabling various scanning and manipulation modes with synchronous optical detection.
Main Results:
- The AFFM successfully performed simultaneous topographic and fluorescence measurements with single-molecule sensitivity.
- Combined topographic and fluorescence spectral imaging significantly improved object discrimination.
- The instrument demonstrated high spatial resolution imaging without compromising AFM capabilities.
Conclusions:
- The developed AFFM integrates AFM's topographic precision with fluorescence spectroscopy's chemical identification.
- This synergistic approach enhances the analysis of complex samples like 2D crystals and biological membranes.
- The AFFM offers a versatile platform for advanced nanoscale imaging and chemical characterization.
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