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DictyMOLD-a Dictyostelium discoideum genome browser database
Marius Felder1, Karol Szafranski, Rüdiger Lehmann
1IMB Jena, Department of Genome Analysis Beutenbergstrasse 11, 07745 Jena, Germany.
Bioinformatics (Oxford, England)
|February 1, 2005
Summary
The DictyMOLD database now offers Dictyostelium discoideum genomic data, including chromosomes 1 and 2 sequences and annotations. A Perl-based browser provides access for the scientific community to visualize this genomic information.
Area of Science:
- Genomics
- Bioinformatics
Background:
- The Dictyostelium Genome Project is nearing completion.
- Dictyostelium discoideum is a model organism in developmental biology.
Purpose of the Study:
- To establish a comprehensive data repository for Dictyostelium discoideum genomic data.
- To provide accessible visualization and access to genomic information for researchers.
Main Methods:
- Construction of the DictyMOLD database.
- Incorporation of Dictyostelium discoideum chromosomes 1 and 2 sequences and annotations.
- Development of a Perl-based browser for data visualization and access.
Main Results:
- The DictyMOLD database now includes completed sequences and annotations for D. discoideum chromosomes 1 and 2.
- A functional browser allows visualization of maps, sequences, and annotations.
Conclusions:
- DictyMOLD serves as a valuable resource for Dictyostelium discoideum genomic data.
- The developed browser enhances accessibility and usability of the genomic information for the scientific community.