The GxxxG-containing transmembrane domain of the CCK4 oncogene does not encode preferential self-interactions
Felix J Kobus1, Karen G Fleming
1T. C. Jenkins Department of Biophysics, Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, USA.
Abstract:
The recently cloned colon carcinoma kinase 4 (CCK4) oncogene contains an evolutionarily conserved GxxxG motif in its single transmembrane domain (TMD). It has previously been suggested that this pairwise glycine motif may provide a strong driving force for transmembrane helix-helix interactions. Since CCK4 is thought to represent a new member of the receptor tyrosine kinase family, interactions between the TMDs may be important in receptor self-association and activation of signal transduction pathways. To determine whether this conserved CCK4 TMD can drive protein-protein interactions, we have carried out a thermodynamic study using the TMD expressed as a Staphylococcal nuclease (SN) fusion protein. Similar SN-TMD fusion proteins have been used to determine the sequence specificity and thermodynamics of transmembrane helix-helix interactions in a number of membrane proteins, including glycophorin A. Using sedimentation equilibrium in C14 betaine micelles, we discovered that the CCK4 TMD is unable to drive strong protein-protein interactions. At high protein/detergent ratios, the SN-CCK4 fusion protein will dimerize, but a stochastic model for protein association in micelles can explain the observed dimer population. For low-affinity interactions such as the one studied here, an understanding of this discrete stochastic distribution of membrane proteins in micelles is important for distinguishing between preferential and random self-interactions, which can both influence the oligomeric population. The lack of a thermodynamically meaningful self-association propensity for the CCK4 TMDs demonstrates that a GxxxG motif is not sufficient to drive transmembrane helix-helix interactions.
Insights
The colon carcinoma kinase 4 (CCK4) transmembrane domain, despite its GxxxG motif, does not drive significant protein-protein interactions. This finding indicates the GxxxG motif alone is insufficient for strong transmembrane helix associations.
Area of Science:
- Molecular Biology
- Biochemistry
- Cell Signaling
Background:
- The colon carcinoma kinase 4 (CCK4) oncogene possesses a conserved GxxxG motif in its transmembrane domain (TMD).
- This motif has been hypothesized to mediate transmembrane helix-helix interactions, crucial for receptor tyrosine kinase (RTK) family members.
- CCK4's potential role in receptor self-association and signal transduction necessitates understanding its TMD's interaction capabilities.
Purpose of the Study:
- To investigate whether the CCK4 transmembrane domain (TMD) can thermodynamically drive protein-protein interactions.
- To assess the role of the conserved GxxxG motif in mediating these interactions.
Main Methods:
- A thermodynamic study was performed using a Staphylococcal nuclease (SN) fusion protein containing the CCK4 TMD.
- Sedimentation equilibrium in C14 betaine micelles was employed to analyze protein association.
- A stochastic model was used to interpret protein association in micelles.
Main Results:
- The CCK4 TMD demonstrated an inability to drive strong protein-protein interactions.
- Dimerization of the SN-CCK4 fusion protein at high ratios was observed but explained by stochastic association.
- The study distinguished between preferential and random self-interactions in micelle systems.
Conclusions:
- The conserved GxxxG motif within the CCK4 TMD is insufficient on its own to drive thermodynamically significant transmembrane helix-helix interactions.
- This suggests other factors likely contribute to the self-association of CCK4 or similar transmembrane proteins.
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