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Related Experiment Videos

Host gene expression changes and DNA amplification during temperate phage induction.

Jonathan G Frye1, Steffen Porwollik, Felisa Blackmer

  • 1Sidney Kimmel Cancer Center, 10835 Altman Row, San Diego, CA 92121, USA.

Journal of Bacteriology
|February 3, 2005
PubMed
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Salmonella Typhimurium prophages can trigger host genome amplification, termed escape replication, during lytic induction. This phenomenon, observed with Fels-1 and Gifsy-1 phages, suggests widespread host genome instability during phage replication.

Area of Science:

  • Microbiology
  • Molecular Biology
  • Genomics

Background:

  • Salmonella enterica serovar Typhimurium LT2 harbors four temperate prophages.
  • Prophage induction initiates a lytic cycle, impacting host cell processes.

Purpose of the Study:

  • To investigate phage-host genome interactions during lytic induction.
  • To characterize the phenomenon of escape replication in Salmonella prophages.

Main Methods:

  • Induction of lytic cycle using hydrogen peroxide or mitomycin C.
  • Microarray analysis to monitor phage genome copy number and host RNA expression.
  • Genetic manipulation of prophage genes (xis, integrase).

Main Results:

  • Phage gene transcription was temporally classified, and host genes responding to induction were identified.

Related Experiment Videos

  • Fels-1 prophage induced significant host genome amplification (escape replication) prior to excision.
  • Mutations in Fels-1 excisionase (xis) or Gifsy-1 integrase/excisionase genes also triggered escape replication.
  • Host genome amplification was observed in other Salmonella Typhimurium strains (SL1344, 14028s) upon phage induction.
  • Conclusions:

    • Escape replication, a host genome amplification phenomenon, is induced by Salmonella prophages during lytic cycles.
    • This process is linked to phage replication mechanisms and can be modulated by specific phage genes.
    • Escape replication may be a widespread event in Salmonella and other bacterial species harboring prophages.