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Published on: June 19, 2013
[Intraspecific chromosomal variability in human pathogenic fungi, especially in Histoplasma capsulatum]
Rafael Romero-Martínez1, Cristina Canteros, Maria Lucia Taylor
1Laboratorio de Inmunología de Hongos, Departamento Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autónoma de México, Mexico DF, Mexico.
Abstract:
The ploidy, karyotype, and chromosome length polymorphism (CLP) of human pathogenic fungi were revised with emphasis on Histoplasma capsulatum, the causative agent of the systemic mycosis, histoplasmosis. Currently, different systems of gel electrophoresis are being used to determine fungal electrokaryotypes (EK). By renaturation kinetic and genomic reconstruction in H. capsulatum strains (G-186AS and Downs), estimated genome sizes of 23 and 32 Mb were determined for both strains, respectively. The haploid state was proposed for both strains, although aneuploidy was suggested for the Downs strain. Contour-clamped homogeneous electric field (CHEF), field inversion gel electrophoresis (FIGE), and Southern blot using different probes showed the presence of six to seven chromosomes in the Downs strain (low virulence), whereas four chromosomes were identified in the G-186B strain (high virulence). The use of these methods in the three major H. capsulatum reference strains (G-217B and Downs from the United States of America, G-186B from Panama) revealed distinct chromosome sizes, from 0.5 to 5.7 Mb, with CLP associated with chromosomes size and mobility. Recently, by CHEF, using 19 H. capsulatum isolates from Latin-America and the G-186B strain, five to seven chromosomes with 1.1 to 11.2 Mb molecular sizes were revealed, which again suggested CLP in H. capsulatum. However, to elucidate the EKs polymorphism in H. capsulatum and its relationship with the isolates phenotype more studies are needed to understand the mechanisms controlling ploidy variability.
Insights
This study revises fungal ploidy and chromosome length polymorphism (CLP) in Histoplasma capsulatum, the fungus causing histoplasmosis. Electrophoresis revealed variations in chromosome number and size, suggesting CLP is linked to virulence.
Area of Science:
- Mycology
- Medical Mycology
- Fungal Genetics
Background:
- Human pathogenic fungi, particularly Histoplasma capsulatum, exhibit variations in ploidy, karyotype, and chromosome length polymorphism (CLP).
- Electrokaryotypes (EKs) are crucial for understanding fungal genome organization and variability.
- Histoplasma capsulatum is the primary etiological agent of histoplasmosis, a significant systemic mycosis.
Purpose of the Study:
- To revise the understanding of ploidy, karyotype, and CLP in human pathogenic fungi, focusing on Histoplasma capsulatum.
- To investigate the relationship between electrokaryotype variations and virulence in different H. capsulatum strains.
- To estimate genome sizes and analyze chromosome number and size using advanced molecular techniques.
Main Methods:
- Gel electrophoresis techniques including Contour-clamped homogeneous electric field (CHEF) and Field inversion gel electrophoresis (FIGE).
- Southern blot analysis using various probes for detailed genomic investigation.
- Renaturation kinetics and genomic reconstruction for genome size estimation.
Main Results:
- Estimated genome sizes of 23 Mb (G-186AS) and 32 Mb (Downs strain) for H. capsulatum, with aneuploidy suggested for the Downs strain.
- The low-virulence Downs strain exhibited six to seven chromosomes, while the high-virulence G-186B strain showed four chromosomes.
- Chromosome Length Polymorphism (CLP) was observed across different H. capsulatum strains and isolates, correlating with chromosome size and mobility.
Conclusions:
- Electrokaryotype (EK) analysis reveals significant variability in chromosome number and size within Histoplasma capsulatum.
- Chromosome Length Polymorphism (CLP) is associated with virulence differences among H. capsulatum strains.
- Further research is required to understand the mechanisms governing ploidy variability and its phenotypic impact in H. capsulatum.
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