[Intraspecific chromosomal variability in human pathogenic fungi, especially in Histoplasma capsulatum]

Rafael Romero-Martínez1, Cristina Canteros, Maria Lucia Taylor

  • 1Laboratorio de Inmunología de Hongos, Departamento Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autónoma de México, Mexico DF, Mexico.

Insights

This study revises fungal ploidy and chromosome length polymorphism (CLP) in Histoplasma capsulatum, the fungus causing histoplasmosis. Electrophoresis revealed variations in chromosome number and size, suggesting CLP is linked to virulence.

Area of Science:

  • Mycology
  • Medical Mycology
  • Fungal Genetics

Background:

  • Human pathogenic fungi, particularly Histoplasma capsulatum, exhibit variations in ploidy, karyotype, and chromosome length polymorphism (CLP).
  • Electrokaryotypes (EKs) are crucial for understanding fungal genome organization and variability.
  • Histoplasma capsulatum is the primary etiological agent of histoplasmosis, a significant systemic mycosis.

Purpose of the Study:

  • To revise the understanding of ploidy, karyotype, and CLP in human pathogenic fungi, focusing on Histoplasma capsulatum.
  • To investigate the relationship between electrokaryotype variations and virulence in different H. capsulatum strains.
  • To estimate genome sizes and analyze chromosome number and size using advanced molecular techniques.

Main Methods:

  • Gel electrophoresis techniques including Contour-clamped homogeneous electric field (CHEF) and Field inversion gel electrophoresis (FIGE).
  • Southern blot analysis using various probes for detailed genomic investigation.
  • Renaturation kinetics and genomic reconstruction for genome size estimation.

Main Results:

  • Estimated genome sizes of 23 Mb (G-186AS) and 32 Mb (Downs strain) for H. capsulatum, with aneuploidy suggested for the Downs strain.
  • The low-virulence Downs strain exhibited six to seven chromosomes, while the high-virulence G-186B strain showed four chromosomes.
  • Chromosome Length Polymorphism (CLP) was observed across different H. capsulatum strains and isolates, correlating with chromosome size and mobility.

Conclusions:

  • Electrokaryotype (EK) analysis reveals significant variability in chromosome number and size within Histoplasma capsulatum.
  • Chromosome Length Polymorphism (CLP) is associated with virulence differences among H. capsulatum strains.
  • Further research is required to understand the mechanisms governing ploidy variability and its phenotypic impact in H. capsulatum.

Related Concept Videos

Fungal Phylum Microsporidia01:28

Fungal Phylum Microsporidia

Microsporidia are a group of obligate intracellular fungi that were initially classified as protists but were later reclassified based on phylogenetic, molecular, and structural evidence linking them to the Chytridiomycota. These unicellular, non-motile organisms are highly specialized parasites that infect a wide range of animal hosts, including humans. They have evolved extensive genomic and metabolic reductions, making them highly dependent on their hosts for survival.Morphology and Genomic...
Comparing Copy Number Variations and SNPs02:26

Comparing Copy Number Variations and SNPs

Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Single Nucleotide Polymorphisms-SNPs01:05

Single Nucleotide Polymorphisms-SNPs

A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
Mutations in Microorganisms01:18

Mutations in Microorganisms

Mutations are heritable changes in an organism’s genome involving alterations in the base sequence of DNA or RNA. These changes can influence cellular processes and phenotypic traits, potentially transforming the unaltered wild type into a mutant form. Such changes, termed forward mutations, are pivotal in shaping the genetic diversity of organisms.RNA viruses exhibit the highest mutation rates due to the absence of robust proofreading mechanisms during genome replication. In contrast,...
Genetic Variation01:25

Genetic Variation

Genetic variation is the diversity in DNA sequences found among individuals of the same species. This diversity is crucial for a species' survival because it helps organisms adapt to environmental changes. Genetic variation begins with fertilization, where an egg and sperm cell merge. Each of these cells carries 23 chromosomes, up to 46 in the fertilized egg. Chromosomes are long DNA strands that contain genes, the basic units of heredity.
Genes exist in different versions called alleles, which...
Histone Variants at the Centromere02:30

Histone Variants at the Centromere

Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3 variants are also...