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Updated: Aug 19, 2026

Unveiling Therapeutic Opportunities with Melanoma Patient-derived Organoid Models
Published on: September 6, 2024
Phosphorothioate oligodeoxynucleotides and G3139 induce apoptosis in 518A2 melanoma cells
Johnathan C Lai1, Luba Benimetskaya, Anastasia Khvorova
1Department of Biomedical Engineering, Columbia University, New York, New York, USA.
Abstract:
In a previous study, we showed that G3139, an antisense phosphorothioate oligonucleotide that down-regulates the expression of Bcl-2 protein, did not cause chemosensitization of 518A2 melanoma cells. In this work, we show that G3139, and the 2-base mismatch, G4126, can initiate apoptosis in this and other melanoma cell lines as shown by increased cell surface Annexin V expression, typical nuclear phenotypic changes as assessed by 4',6-diamidino-2-phenylindole staining, activation of caspase-3 (but not caspase-8) and Bid, appearance of DEVDase (but not IETDase) activity, and cleavage of poly(ADP-ribose)-polymerase 1. Depolarization of the mitochondrial membrane occurs as a relatively late event. All of these processes seem to be substantially, but perhaps not totally, Bcl-2 independent as shown by experiments employing an anti-Bcl-2 small interfering RNA, which as shown previously down-regulated Bcl-2 protein expression but did not produce apoptosis or chemosensitization in melanoma cells. In fact, these G3139-induced molecular events were not dramatically altered in cells that forcibly overexpressed high levels of Bcl-2 protein. Addition of irreversible caspase inhibitors (e.g., the pan-caspase inhibitor zVAD-fmk) to G3139-treated cells almost completely blocked cytotoxicity. Examination of the time course of the appearance of caspase-3 and cleaved poly(ADP-ribose)-polymerase 1 showed that this could be correlated with the release of cytochrome c from the mitochondria, an event that begins only approximately 4 hours after the end of the oligonucleotide/LipofectAMINE 2000 5-hour transfection period. Thus, both G3139 and cytotoxic chemotherapy activate the intrinsic pathway of apoptosis in these cells, although Bcl-2 expression does not seem to contribute strongly to chemoresistance. These findings suggest that the attainment of G3139-induced chemosensitization in these cells will be difficult.
Insights
G3139 initiates apoptosis in melanoma cells via the intrinsic pathway, independent of Bcl-2. This suggests chemosensitization by G3139 may be challenging to achieve in these cancer cells.
Area of Science:
- Molecular Biology
- Cancer Research
- Apoptosis Signaling
Background:
- Previous studies indicated G3139, an antisense oligonucleotide targeting Bcl-2, did not sensitize melanoma cells to chemotherapy.
- Melanoma cell lines exhibit varying resistance mechanisms, including Bcl-2 overexpression, impacting therapeutic outcomes.
Purpose of the Study:
- To investigate the mechanism by which G3139 and its analog G4126 induce apoptosis in melanoma cells.
- To determine the role of Bcl-2 in G3139-mediated apoptosis and potential chemosensitization.
Main Methods:
- Assessed apoptosis using Annexin V expression and 4',6-diamidino-2-phenylindole staining.
- Measured caspase activation (caspase-3, caspase-8), Bid cleavage, DEVDase/IETDase activity, and PARP-1 cleavage.
- Investigated mitochondrial membrane depolarization, cytochrome c release, and effects of Bcl-2 knockdown/overexpression and caspase inhibitors.
Main Results:
- G3139 and G4126 induced apoptosis, characterized by nuclear changes, caspase-3 activation, and PARP-1 cleavage, independent of Bcl-2.
- Mitochondrial pathway activation, including cytochrome c release, preceded late apoptotic events.
- Caspase inhibition abrogated G3139-induced cytotoxicity, confirming caspase-dependent cell death.
Conclusions:
- G3139 and G4126 activate the intrinsic apoptosis pathway in melanoma cells, largely independent of Bcl-2 expression levels.
- Bcl-2 does not appear to be a major contributor to chemoresistance in these G3139-treated melanoma cells.
- Achieving G3139-mediated chemosensitization in these melanoma cells is likely to be difficult due to the intrinsic apoptotic mechanism.
Related Concept Videos
The Intrinsic Apoptotic Pathway
The Extrinsic Apoptotic Pathway
