Related Experiment Video
Updated: Aug 19, 2026

A Method for Screening and Validation of Resistant Mutations Against Kinase Inhibitors
Published on: December 7, 2014
A cell-based screening strategy that predicts mutations in oncogenic tyrosine kinases: implications for clinical
Nikolas von Bubnoff1, Simone Barwisch, Michael R Speicher
1Department of Internal Medicine III, Technical University of Munich, Munich, Germany. n.bubnoff@lrz.tum.de
Abstract:
The discovery of tyrosine kinases that, once deregulated, can cause malignancy, allowed the development of specifically acting anti-cancer compounds. In chronic myeloid leukaemia (CML), the Bcr-Abl kinase inhibitor imatinib (STI571, Gleevec) induces impressive response rates. However, resistance occurs especially in advanced phase CML and Ph+ ALL, primarily as a consequence of point mutations within the Bcr-Abl kinase domain that prevent imatinib from binding. To overcome imatinib resistance, alternative Abl kinase inhibitors are finding their way into clinical trials. However, it is likely that resistance to second-generation compounds will occur as well. Therefore, it will be critical to determine specific resistance profiles for each particular compound. We recently developed a cell-based screening strategy that allows one to predict the pattern and relative abundance of Bcr-Abl resistance mutations emerging in the presence of imatinib or an alternative Abl-kinase inhibitor. Using this strategy, the findings in inhibitor resistant sublines reflect observations made in CML patients with imatinib resistance, including Bcr-Abl mutations, amplification of the Bcr-Abl gene, and overexpression of the Bcr-Abl protein. We here provide a detailed methodological description, and discuss the implications of this strategy for different clinically relevant oncogenic tyrosine kinases.
Insights
Drug resistance in chronic myeloid leukemia (CML) is a major challenge. A new cell-based screening strategy predicts Bcr-Abl mutations, aiding the development of targeted therapies for CML and other cancers.
Area of Science:
- Oncology
- Molecular Biology
- Pharmacology
Background:
- Deregulation of tyrosine kinases can lead to malignancy, prompting the development of targeted anti-cancer drugs.
- Imatinib is effective against chronic myeloid leukemia (CML) but resistance, often due to Bcr-Abl mutations, limits its long-term efficacy, particularly in advanced CML and Philadelphia chromosome-positive acute lymphoblastic leukemia (Ph+ ALL).
Purpose of the Study:
- To develop and validate a cell-based screening strategy for predicting Bcr-Abl resistance mutations.
- To understand resistance profiles associated with imatinib and alternative Abl kinase inhibitors.
Main Methods:
- Development of a cell-based screening assay to identify emerging Bcr-Abl resistance mutations.
- Analysis of resistance patterns, including point mutations, gene amplification, and protein overexpression, in inhibitor-resistant cell lines.
- Comparison of in vitro findings with clinical observations in CML patients.
Main Results:
- The screening strategy successfully predicted the pattern and abundance of Bcr-Abl resistance mutations.
- Observed resistance mechanisms in cell lines mirrored those found in imatinib-resistant CML patients, including specific Bcr-Abl mutations, gene amplification, and protein overexpression.
- The findings support the clinical relevance of the developed screening method.
Conclusions:
- The cell-based screening strategy is a valuable tool for predicting resistance mutations to Abl kinase inhibitors.
- This approach can inform the development of personalized treatment strategies for CML and potentially other cancers driven by oncogenic tyrosine kinases.
- Understanding specific resistance profiles is crucial for overcoming therapeutic challenges posed by emerging resistance to targeted therapies.
Related Concept Videos
Targeted Cancer Therapies
There are several types of targeted therapies against specific...
Combination Therapies and Personalized Medicine
The combination of the drug acetazolamide and sulforaphane is a good example of combination therapy to treat cancer. The cells in the interior of a large tumor often die due to the hypoxic and...
Genetic Screens
Forward genetic screens
Forward or “classical” genetic screens involve creating random mutations in an organism’s DNA using radiation, mutagens, or insertion of additional bases, which result in visible changes...
Cancer
Mitogens and the Cell Cycle
Treatment Resistant Cancers

