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Updated: Aug 19, 2026

Identification of Transcription Factor Regulators using Medium-Throughput Screening of Arrayed Libraries and a Dual-Luciferase-Based Reporter
Published on: March 27, 2020
Inhibition of protein synthesis by Y box-binding protein 1 blocks oncogenic cell transformation
Andreas G Bader1, Peter K Vogt
1Department of Molecular and Experimental Medicine, The Scripps Research Institute, 10550 North Torrey Pines Rd., BCC239, La Jolla, CA 92037, USA. andreas@scripps.edu
Abstract:
The multifunctional Y box-binding protein 1 (YB-1) is transcriptionally repressed by the oncogenic phosphoinositide 3-kinase (PI3K) pathway (with P3K as an oncogenic homolog of the catalytic subunit) and, when reexpressed with the retroviral vector RCAS, interferes with P3K- and Akt-induced transformation of chicken embryo fibroblasts. Retrovirally expressed YB-1 binds to the cap of mRNAs and inhibits cap-dependent and cap-independent translation. To determine the requirements for the inhibitory role of YB-1 in P3K-induced transformation, we conducted a mutational analysis, measuring YB-1-induced interference with transformation, subcellular localization, cap binding, mRNA binding, homodimerization, and inhibition of translation. The results show that (i) interference with transformation requires RNA binding and a C-terminal domain that is distinct from the cytoplasmic retention domain, (ii) interference with transformation is tightly correlated with inhibition of translation, and (iii) masking of mRNAs by YB-1 is not sufficient to block transformation or to inhibit translation. We identified a noncanonical nuclear localization signal (NLS) in the C-terminal half of YB-1. A mutant lacking the NLS retains its ability to interfere with transformation, indicating that a nuclear function is not required. These results suggest that YB-1 interferes with P3K-induced transformation by a specific inhibition of translation through its RNA-binding domain and a region in the C-terminal domain. Potential functions of the C-terminal region are discussed.
Insights
Y box-binding protein 1 (YB-1) inhibits cancer cell growth by blocking translation, independent of its nuclear localization. This RNA-binding protein requires specific domains to interfere with oncogenic signaling pathways.
Area of Science:
- Molecular Biology
- Oncology
- Cell Biology
Background:
- Y box-binding protein 1 (YB-1) is a multifunctional protein known to be repressed by the phosphoinositide 3-kinase (PI3K) pathway.
- YB-1 can interfere with oncogenic transformation when reexpressed, suggesting a role in cancer regulation.
Purpose of the Study:
- To elucidate the molecular requirements for YB-1's inhibitory function in PI3K-induced cell transformation.
- To determine the specific domains and mechanisms by which YB-1 exerts its anti-transformational effects.
Main Methods:
- Mutational analysis of YB-1 to assess its impact on transformation, localization, RNA binding, and translation inhibition.
- Utilized retroviral vectors (RCAS) for protein expression in chicken embryo fibroblasts.
- Investigated cap binding, mRNA binding, homodimerization, and translation inhibition capabilities of YB-1 mutants.
Main Results:
- YB-1's interference with transformation necessitates RNA binding and a distinct C-terminal domain, separate from the cytoplasmic retention domain.
- A strong correlation exists between YB-1's ability to interfere with transformation and its inhibition of translation.
- A noncanonical nuclear localization signal (NLS) was identified, but its absence did not impair YB-1's anti-transformational activity, indicating a non-nuclear function.
Conclusions:
- YB-1 inhibits PI3K-induced transformation through specific translation inhibition, mediated by its RNA-binding and C-terminal domains.
- The anti-transformational function of YB-1 is independent of its nuclear localization.
- These findings highlight YB-1 as a potential therapeutic target in cancers driven by the PI3K pathway.
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