Related Experiment Video
Updated: Aug 19, 2026

T4 Bacteriophage and E. coli Interaction in the Murine Intestine: A Prototypical Model for Studying Host-Bacteriophage Dynamics In Vivo
Published on: January 26, 2024
Characterization of the cro-ori region of the Streptococcus thermophilus virulent bacteriophage DT1
Geneviève Lamothe1, Céline Lévesque, Frédéric Bissonnette
1Groupe de Recherche en Ecologie Buccale, Faculté de Médecine Dentaire, Université Laval, Québec, Canada G1K 7P4.
Abstract:
The virulent cos-type Streptococcus thermophilus phage DT1 was previously isolated from a mozzarella whey sample, and its complete genomic sequence is available. The putative ori of phage DT1 is characterized by three inverted and two direct repeats located in a noncoding region between orf36 and orf37. As the replication ability of the putative ori and flanking genes could not be established, its ability to confer phage resistance was tested. When ori is cloned on a high-copy-number plasmid, it provides protection to S. thermophilus strains against phage infection during milk fermentation. This protection is phage specific and strain dependent. Then, a detailed transcriptional map was established for the region located between the cro-like gene (orf29) and the ori. The results of the Northern blots indicated that the transcription of this region started 5 min after the onset of phage infection. Comparative analysis of the expression of the cro-ori region in the three S. thermophilus cos-type phages DT1, Sfi19 (virulent), and Sfi21 (temperate) reveals significant differences in the number and size of transcripts. The promoter upstream of orf29 was further investigated by primer extension analysis, and its activity was confirmed by a chloramphenicol acetyltransferase assay, which showed that the phage promoter is more efficient than the constitutive bacterial promoter of the S. thermophilus operon encoding the general proteins of the phosphoenolpyruvate:sugar phosphotransferase system. However, the phage promoter is less efficient than the pts promoter in Lactococcus lactis and in Escherichia coli.
Insights
The origin of replication (ori) from Streptococcus thermophilus phage DT1 confers phage resistance to bacterial strains during milk fermentation. This protection is specific to the phage and dependent on the bacterial strain.
Area of Science:
- Microbiology
- Bacteriology
- Virology
Background:
- Streptococcus thermophilus phage DT1, a virulent cos-type phage, has a fully sequenced genome.
- A putative origin of replication (ori) with repeat sequences was identified.
- The replication ability of the ori and its flanking genes was unconfirmed.
Purpose of the Study:
- To investigate the phage resistance conferred by the putative ori of phage DT1.
- To establish a transcriptional map of the region between a cro-like gene (orf29) and the ori.
- To compare the expression of this region across different S. thermophilus phages.
Main Methods:
- Cloning the ori onto a high-copy-number plasmid to test phage resistance.
- Northern blot analysis to determine transcriptional patterns.
- Primer extension and chloramphenicol acetyltransferase (CAT) assays to characterize promoter activity.
Main Results:
- Cloned ori provided phage resistance to S. thermophilus during milk fermentation, demonstrating strain and phage specificity.
- Transcription initiated 5 minutes post-infection, with distinct transcript profiles observed for phages DT1, Sfi19, and Sfi21.
- The phage promoter upstream of orf29 was active and more efficient than the S. thermophilus phosphoenolpyruvate:sugar phosphotransferase (pts) promoter, but less efficient than pts promoters in Lactococcus lactis and Escherichia coli.
Conclusions:
- The ori of phage DT1 can confer phage resistance in S. thermophilus, offering potential applications in controlling phage infections in dairy fermentation.
- Transcriptional analysis revealed specific expression patterns for the cro-ori region in different phages.
- The phage promoter exhibits significant activity, highlighting its role in phage gene regulation.
More Related Videos
Related Concept Videos
DNA Bacteriophages
Bacteriophages of the Human Virome
Lytic Cycle of Bacteriophages
Viral Replication: Lytic Cycle
Lysogenic Cycle of Bacteriophages
Bacterial Phylum Tenericutes

