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Updated: Aug 17, 2026

Multiple-mouse Neuroanatomical Magnetic Resonance Imaging
Published on: February 27, 2011
Manganese-enhanced magnetic resonance imaging (MEMRI) of mouse brain development
Youssef Zaim Wadghiri1, Jeffrey A Blind, Xiaohong Duan
1Skirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, NY 10016, USA.
Abstract:
Given the importance of genetically modified mice in studies of mammalian brain development and human congenital brain diseases, MRI has the potential to provide an efficient in vivo approach for analyzing mutant phenotypes in the early postnatal mouse brain. The combination of reduced tissue contrast at the high magnetic fields required for mice, and the changing cellular composition of the developing mouse brain make it difficult to optimize MRI contrast in neonatal mouse imaging. We have explored an easily implemented approach for contrast-enhanced imaging, using systemically administered manganese (Mn) to reveal fine anatomical detail in T1-weighted MR images of neonatal mouse brains. In particular, we demonstrate the utility of this Mn-enhanced MRI (MEMRI) method for analyzing early postnatal patterning of the mouse cerebellum. Through comparisons with matched histological sections, we further show that MEMRI enhancement correlates qualitatively with granule cell density in the developing cerebellum, suggesting that the cerebellar enhancement is due to uptake of Mn in the granule neurons. Finally, variable cerebellar defects in mice with a conditional mutation in the Gbx2 gene were analyzed with MEMRI to demonstrate the utility of this method for mutant mouse phenotyping. Taken together, our results indicate that MEMRI provides an efficient and powerful in vivo method for analyzing neonatal brain development in normal and genetically engineered mice.
Insights
Manganese-enhanced MRI (MEMRI) improves visualization of neonatal mouse brains, aiding in the study of brain development and congenital diseases. This technique effectively reveals anatomical details and aids in phenotyping genetically modified mice.
Area of Science:
- Neuroscience
- Developmental Biology
- Medical Imaging
Background:
- Genetically modified mice are crucial for studying mammalian brain development and human congenital brain diseases.
- Optimizing MRI contrast in neonatal mouse brains is challenging due to low tissue contrast and changing cellular composition.
Purpose of the Study:
- To develop an efficient in vivo method for analyzing neonatal mouse brain development using contrast-enhanced MRI.
- To demonstrate the utility of manganese-enhanced MRI (MEMRI) for phenotyping genetically modified mice.
Main Methods:
- Systemic administration of manganese (Mn) for contrast enhancement in T1-weighted MRI.
- Analysis of early postnatal cerebellar patterning in neonatal mouse brains.
- Comparison of MEMRI data with histological sections.
- Phenotypic analysis of cerebellar defects in Gbx2 mutant mice using MEMRI.
Main Results:
- MEMRI effectively reveals fine anatomical detail in T1-weighted MR images of neonatal mouse brains.
- MEMRI enhancement in the cerebellum correlates with granule cell density, indicating Mn uptake in neurons.
- MEMRI successfully identified variable cerebellar defects in Gbx2 mutant mice.
Conclusions:
- MEMRI is an efficient and powerful in vivo method for analyzing neonatal brain development.
- This technique is valuable for studying both normal and genetically engineered mice, aiding in the understanding of congenital brain diseases.

