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Updated: Aug 19, 2026

Navigating the Mass Spectrometry-Based Proteomic Data Using Free Computational Tools
Published on: August 19, 2025
Developing an understanding of proteomics: an introduction to biological mass spectrometry
John Koomen1, David Hawke, Ryuji Kobayashi
1Proteomics Facility, Department of Molecular Pathology, University of Texas M D Anderson Cancer Center, Houston, TX 77030, USA. jkoomen@mail.mdanderson.org
Abstract:
Three components form the foundation of the rapidly growing field of proteomics research: traditional protein chemistry experiments, separations science, and biological mass spectrometry. The increasing demand for proteomics, as well as the presentation of the 2003 Nobel Prize to John Fenn and Koichi Tanaka for ion source development, has placed biological mass spectrometry in the scientific spotlight. A basic understanding of mass spectrometry is increasingly important for basic, translational, and clinical research. This review article presents an introduction to mass spectrometry, a brief description of different mass spectrometry experiments, and new developments in the field.
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