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Optimization of a Multiplex RNA-based Expression Assay Using Breast Cancer Archival Material
Published on: August 1, 2018
Deregulated expression of the PER1, PER2 and PER3 genes in breast cancers
Shou-Tung Chen1, Kong-Bung Choo, Ming-Feng Hou
1Department of Molecular Medicine, China Medical University Hospital, Taichung, Taiwan.
Abstract:
Disruption of circadian rhythm may be a risk factor in the development of breast cancer, but molecular changes in circadian rhythm controlled genes in breast cancer cells are still unexplored. We used immunohistochemical staining, methylation specific PCR and direct sequencing methods to analyze molecular changes in three most important genes, namely PER1, PER2 and PER3, in circadian rhythm in 55 cases of breast cancer of Taiwanese women. Our results reveal disturbances in the expression of the three period (PER) genes in most (>95%) of the breast cancerous cells in comparison with the nearby non-cancerous cells. The PER gene deregulation is not caused by genetic mutations but most probably by methylation of the PER1 or PER2 promoter. Methylation of the PER gene promoters has a strong correlation with c-erbB2 expression (P = 0.017). Since the circadian clock controls expression of cell-cycle related genes, we suggest that disturbances in PER gene expression may result in disruption of the control of the normal circadian clock, thus benefiting the survival of cancer cells and promoting carcinogenesis. Differential expression of circadian genes in non-cancerous and cancerous cells may provide a molecular basis for chronotherapy of breast cancer.
Insights
Disruptions in circadian rhythm genes (PER1, PER2, PER3) are prevalent in breast cancer, likely due to promoter methylation, not mutations. This deregulation may promote cancer development and offers potential for chronotherapy.
Area of Science:
- Molecular Biology
- Oncology
- Chronobiology
Background:
- Circadian rhythm disruption is a potential breast cancer risk factor.
- Molecular mechanisms of circadian gene regulation in breast cancer remain largely unknown.
Purpose of the Study:
- To investigate molecular alterations in circadian rhythm genes (PER1, PER2, PER3) in Taiwanese breast cancer patients.
- To explore the role of these genes in breast cancer development and their potential as therapeutic targets.
Main Methods:
- Immunohistochemical staining to assess protein expression.
- Methylation-specific PCR and direct sequencing to analyze gene promoters.
- Analysis of 55 Taiwanese breast cancer cases comparing cancerous and non-cancerous tissues.
Main Results:
- Over 95% of breast cancer cells showed altered expression of PER1, PER2, and PER3 compared to normal cells.
- Gene deregulation was attributed to promoter methylation of PER1 or PER2, not genetic mutations.
- PER gene promoter methylation strongly correlated with c-erbB2 expression (P = 0.017).
Conclusions:
- Disturbances in circadian PER gene expression, likely via methylation, disrupt normal circadian clock control, potentially aiding cancer cell survival and progression.
- Differential expression of circadian genes presents a molecular basis for developing chronotherapy for breast cancer.
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