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Updated: Aug 18, 2026

Mass Spectrometry and Luminogenic-based Approaches to Characterize Phase I Metabolic Competency of In Vitro Cell Cultures
Published on: March 28, 2017
Conditional regulation of the human CYP4X1 and CYP4Z1 genes
Uzen Savas1, Mei-Hui Hsu, Keith J Griffin
1Division of Biochemistry, Department of Molecular and Experimental Medicine, The Scripps Research Institute, La Jolla, CA, USA.
Abstract:
Cytochrome P450 genes (CYPs) encoding two new subfamilies designated CYP4X1 and CYP4Z1 were identified in the human genome and the Expressed Sequence Tags database. Partial cDNAs encoding both P450s were isolated from human kidney and used to determine tissue distribution. CYP4X1 was predominantly expressed in trachea and aorta, whereas CYP4Z1 mRNA was preferentially expressed in mammary tissue. In T47-D cells, CYP4Z1 mRNA levels were induced by dexamethasone (14-fold) or by progesterone (10-fold). The induction by these compounds was suppressed by co-treatment with the progesterone and glucocorticoid receptor antagonist mifepristone (RU486). In the progesterone receptor negative MCF-7 cells, CYP4Z1 mRNA was induced by dexamethasone but not by progesterone treatment. CYP4Z1 mRNA levels were unaffected by 17beta-estradiol. In confluent cultures of human hepatoma HepG2 cells that stably express a mouse peroxisome proliferator activated receptor-alpha (PPARalpha) mutant, CYP4X1 mRNA was undetectable in vehicle-treated cells but was readily detectable following addition of the PPARalpha agonist Wy14643. This suggests that PPARalpha activation can affect human CYP4X1 gene transcription. These results demonstrate selective tissue expression and implicate PPARalpha in CYP4X1 regulation, and the glucocorticoid and progesterone receptors in CYP4Z1 gene activation.
Insights
Two novel human cytochrome P450 genes, CYP4X1 and CYP4Z1, show distinct tissue expression patterns. Their gene expression is regulated by peroxisome proliferator-activated receptor-alpha (PPARα) and steroid hormone receptors.
Area of Science:
- Genomics
- Molecular Biology
- Pharmacology
Background:
- The human genome contains numerous cytochrome P450 (CYP) genes involved in drug metabolism and signaling.
- Identification of novel CYP subfamilies is crucial for understanding their biological roles and potential therapeutic implications.
Purpose of the Study:
- To identify and characterize two new human CYP subfamilies, CYP4X1 and CYP4Z1.
- To investigate the tissue distribution and regulatory mechanisms of CYP4X1 and CYP4Z1 gene expression.
Main Methods:
- Human genome and Expressed Sequence Tags database mining for novel CYP genes.
- Isolation of partial cDNAs and tissue distribution analysis using quantitative methods.
- Hormonal induction studies in cell lines (T47-D, MCF-7) and receptor antagonist assays.
- Analysis of gene transcription regulation by peroxisome proliferator-activated receptor-alpha (PPARα) in HepG2 cells.
Main Results:
- CYP4X1 and CYP4Z1 subfamilies were identified in the human genome.
- CYP4X1 showed predominant expression in trachea and aorta.
- CYP4Z1 was preferentially expressed in mammary tissue and its expression was induced by dexamethasone and progesterone via respective receptors.
- PPARα activation significantly induced CYP4X1 mRNA levels in HepG2 cells.
Conclusions:
- CYP4X1 and CYP4Z1 exhibit selective tissue expression patterns.
- PPARα activation is implicated in the regulation of CYP4X1 transcription.
- Glucocorticoid and progesterone receptors play a role in the activation of CYP4Z1 gene expression.
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