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Updated: Aug 11, 2026

Optimized Negative Staining: a High-throughput Protocol for Examining Small and Asymmetric Protein Structure by Electron Microscopy
Published on: August 15, 2014
Prepore to pore transition of a cholesterol-dependent cytolysin visualized by electron microscopy
Thanh X Dang1, Eileen M Hotze, Isabelle Rouiller
1Department of Cell Biology, The Scripps Research Institute, 10550 N.Torrey Pines Rd, La Jolla, CA 92037, USA.
Abstract:
Perfringolysin O (PFO), a soluble toxin secreted by the pathogenic Clostridium perfringens, forms large homo-oligomeric pore complexes comprising up to 50 PFO molecules in cholesterol-containing membranes. In this study, electron microscopy (EM) and single-particle image analysis were used to reconstruct two-dimensional (2D) projection maps from images of oligomeric PFO prepore and pore complexes formed on cholesterol-rich lipid layers. The projection maps are characterized by an outer and an inner ring of density peaks. The outer rings of the prepore and pore complexes are very similar; however, the protein densities that make up the inner ring of the pore complex are more intense and discretely resolved than they are for the prepore complex. The change in inner-ring protein density is consistent with a mechanism in which the monomers within the prepore complex make a transition from a partially disordered state to a more ordered transmembrane beta-barrel in the pore complex. Finally, the orientation of the monomers within the oligomeric complexes was determined by visualization of streptavidin (SA) molecules bound to biotinylated cysteine-substituted residues predicted to face either the inner or outer surface of the oligomeric pore complex. This study provides an unprecedented view of the conversion of the PFO prepore to pore complex.
Insights
Clostridium perfringens toxin, perfringolysin O (PFO), forms pores in cell membranes. This study visualizes PFO pore formation, revealing structural changes from prepore to pore complex.
Area of Science:
- Microbiology
- Structural Biology
- Biochemistry
Background:
- Perfringolysin O (PFO) is a toxin from Clostridium perfringens.
- PFO forms large pore complexes in cholesterol-containing membranes.
Purpose of the Study:
- To visualize the structural transformation of PFO prepore to pore complex.
- To understand the mechanism of PFO pore formation.
Main Methods:
- Electron microscopy (EM) and single-particle image analysis.
- Reconstruction of 2D projection maps of PFO prepore and pore complexes.
- Visualization of streptavidin binding to map monomer orientation.
Main Results:
- 2D projection maps revealed distinct outer and inner rings in PFO complexes.
- Inner ring densities changed significantly from prepore to pore, indicating monomer ordering.
- Monomer orientation within the pore complex was determined.
Conclusions:
- The study provides a detailed view of the PFO prepore-to-pore conversion mechanism.
- Structural changes involve monomers transitioning to an ordered transmembrane beta-barrel.
- This work offers insights into toxin-membrane interactions and pore formation.
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