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Published on: January 5, 2016
Enterococcus faecalis phosphomevalonate kinase
Stephanie S Doun1, John W Burgner, Scott D Briggs
1Department of Biochemistry, Purdue University, 175 South University Street, West Lafayette, Indiana 47907-2063, USA.
Abstract:
The six enzymes of the mevalonate pathway of isopentenyl diphosphate biosynthesis represent potential for addressing a pressing human health concern, the development of antibiotics against resistant strains of the Gram-positive streptococci. We previously characterized the first four of the mevalonate pathway enzymes of Enterococcus faecalis, and here characterize the fifth, phosphomevalonate kinase (E.C. 2.7.4.2). E. faecalis genomic DNA and the polymerase chain reaction were used to clone DNA thought to encode phosphomevalonate kinase into pET28b(+). Double-stranded DNA sequencing verified the sequence of the recombinant gene. The encoded N-terminal hexahistidine-tagged protein was expressed in Escherichia coli with induction by isopropylthiogalactoside and purified by Ni(++) affinity chromatography, yield 20 mg protein per liter. Analysis of the purified protein by MALDI-TOF mass spectrometry established it as E. faecalis phosphomevalonate kinase. Analytical ultracentrifugation revealed that the kinase exists in solution primarily as a dimer. Assay for phosphomevalonate kinase activity used pyruvate kinase and lactate dehydrogenase to couple the formation of ADP to the oxidation of NADH. Optimal activity occurred at pH 8.0 and at 37 degrees C. The activation energy was approximately 5.6 kcal/mol. Activity with Mn(++), the preferred cation, was optimal at about 4 mM. Relative rates using different phosphoryl donors were 100 (ATP), 3.6 (GTP), 1.6 (TTP), and 0.4 (CTP). K(m) values were 0.17 mM for ATP and 0.19 mM for (R,S)-5-phosphomevalonate. The specific activity of the purified enzyme was 3.9 micromol substrate converted per minute per milligram protein. Applications to an immobilized enzyme bioreactor and to drug screening and design are discussed.
Insights
Researchers characterized phosphomevalonate kinase, a key enzyme in isopentenyl diphosphate biosynthesis, from Enterococcus faecalis. This work advances the development of novel antibiotics against drug-resistant bacteria.
Area of Science:
- Biochemistry
- Molecular Biology
- Drug Discovery
Background:
- The mevalonate pathway is crucial for isopentenyl diphosphate biosynthesis.
- Developing new antibiotics against resistant Gram-positive streptococci is a significant health challenge.
- Previous studies characterized the initial four enzymes of this pathway in Enterococcus faecalis.
Purpose of the Study:
- To clone, express, and purify phosphomevalonate kinase (E.C. 2.7.4.2) from Enterococcus faecalis.
- To characterize the biochemical properties of the purified enzyme.
- To explore potential applications in antibiotic development and drug screening.
Main Methods:
- Gene cloning using polymerase chain reaction and pET28b(+) vector.
- Protein expression in Escherichia coli and purification via Ni(++) affinity chromatography.
- Enzyme activity assays coupled with NADH oxidation, mass spectrometry, and analytical ultracentrifugation.
Main Results:
- Successfully cloned, expressed, and purified Enterococcus faecalis phosphomevalonate kinase.
- Determined the enzyme's dimeric structure in solution and optimal activity conditions (pH 8.0, 37°C).
- Characterized kinetic parameters, including activation energy (5.6 kcal/mol), optimal cation (Mn++), and substrate affinities (Km for ATP and phosphomevalonate).
Conclusions:
- Phosphomevalonate kinase from Enterococcus faecalis has been biochemically characterized.
- The enzyme's properties provide a basis for its use in an immobilized enzyme bioreactor.
- This research supports the potential of targeting the mevalonate pathway for novel antibiotic development against resistant bacteria.
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