Related Experiment Video
Updated: Aug 18, 2026

Functional Complementation Analysis (FCA): A Laboratory Exercise Designed and Implemented to Supplement the Teaching of Biochemical Pathways
Published on: June 24, 2016
Molecular cloning and functional characterization of fumarases C in Neisseria species
Liuh Ling Goh1, Timothy Barkham, Tiow Suan Sim
1Department of Microbiology, Faculty of Medicine, National University of Singapore, MD4A, 5 Science Drive 2, 117597, Singapore.
Abstract:
Fumarase is one of the key enzymes in the TCA cycle and has been implicated in virulence and survival of some microorganisms under suboptimal environmental conditions. In this study, the fumC genes that encode fumarase C (FUMCs) from Neisseria meningitidis, N. gonorrhoeae and N. subflava were identified by homology-based analysis, cloned by polymerase chain reactions and fully sequenced. The inferred primary sequence of neisserial FUMCs showed a high degree of conservation with 97.8-98.7% amino acid identity. However, phylogenetic analysis revealed that these neisserial FUMCs are divergent from class II fumarases found in other microorganisms, rat and human. The putative fumC genes were subcloned into the expression vector, pGEX-6P-1 and efficiently expressed in Esherichia coli BL21. The purified recombinant fusion proteins obtained by affinity chromatography demonstrated high catalytic activities (120-180 U/mg), thus authenticating the identities and functionalities of the cloned genes. Whether FUMC has any physiological relevance to the pathogenesisity of Neisseriae must await future gene disruption or mutagenesis studies.
Insights
Researchers identified and characterized the fumarase C (FUMC) enzyme in Neisseria species. This enzyme is crucial for the TCA cycle and may play a role in bacterial survival and virulence.
Area of Science:
- Microbiology
- Enzymology
- Molecular Biology
Background:
- Fumarase (FUMC) is a key enzyme in the tricarboxylic acid (TCA) cycle.
- FUMC is implicated in microbial virulence and survival under stress conditions.
Purpose of the Study:
- To identify, clone, and characterize the fumC genes encoding FUMC in Neisseria meningitidis, N. gonorrhoeae, and N. subflava.
- To analyze the conservation, phylogenetic relationship, and enzymatic activity of neisserial FUMCs.
Main Methods:
- Homology-based analysis for gene identification.
- Polymerase chain reaction (PCR) for gene cloning and sequencing.
- Gene expression in Escherichia coli and protein purification via affinity chromatography.
- Enzymatic activity assays.
Main Results:
- Identified and sequenced fumC genes from three Neisseria species.
- Neisserial FUMCs exhibit high amino acid sequence conservation (97.8-98.7%).
- Phylogenetic analysis shows divergence from other microbial, rat, and human Class II fumarases.
- Purified recombinant FUMCs displayed high catalytic activity (120-180 U/mg).
Conclusions:
- The cloned genes encode functional fumarase C enzymes in Neisseria species.
- Neisserial FUMCs are distinct from Class II fumarases found in other organisms.
- Further studies involving gene disruption are needed to elucidate the physiological role of FUMC in Neisseria pathogenesis.
Related Concept Videos
Modern Molecular Taxonomy
Applications of Molecular Taxonomy
