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Semiconductor Sequencing for Preimplantation Genetic Testing for Aneuploidy
Published on: August 25, 2019
cDNA sequence of the pregnancy-specific beta 1-glycoprotein-11s (PSG-11s)
B K Brophy1, R E MacDonald, P A McLenachan
1Department of Microbiology and Genetics, Massey University, Palmerston North, New Zealand.
Insights
Researchers characterized human pregnancy-specific beta 1-glycoprotein-11 (PSG-11) gene clones. The study identified a specific splice variant, PSG-11s, encoding a secreted protein with potential glycosylation sites and a distinct domain structure.
Area of Science:
- Human genetics
- Molecular biology
- Protein biochemistry
Background:
- The human pregnancy-specific beta 1-glycoprotein (PSG) family comprises several related glycoproteins involved in pregnancy.
- Understanding the genetic variations and protein structures within the PSG family is crucial for comprehending their roles during gestation.
Purpose of the Study:
- To characterize cDNA clones of the human pregnancy-specific beta 1-glycoprotein-11 (PSG-11) gene.
- To identify and analyze splice variants of the PSG-11 gene.
- To investigate the structural features of the encoded protein, including glycosylation sites and domain organization.
Main Methods:
- cDNA cloning and sequencing
- Bioinformatic analysis of gene sequences
- Protein domain structure prediction
- Identification of post-translational modification sites (glycosylation)
Main Results:
- Four cDNA clones of the human PSG-11 gene were characterized.
- All clones encoded a splice variant designated PSG-11s.
- The PSG-11s variant encodes a secreted protein of 426 amino acids.
- The protein features six potential N-linked glycosylation sites and a domain structure (L-N-AI-AII-BII-C).
- A restriction site polymorphism (ApaI) was identified, potentially distinguishing between PSG-11 gene alleles.
Conclusions:
- The characterized cDNA clones represent a specific splice variant (PSG-11s) of the human PSG-11 gene.
- The PSG-11s protein possesses structural features, including glycosylation sites and a defined domain structure, relevant to its function.
- The identified ApaI restriction site polymorphism may serve as a genetic marker for differentiating PSG-11 alleles.
Abstract:
Four cDNA clones representing the human pregnancy-specific beta 1-glycoprotein-11 (PSG-11) gene have been characterised. All encoded a splice variant of the PSG-11 gene designated PSG-11s, which can encode a secreted protein of 426 amino acids, containing six potential N-linked glycosylation sites, with a domain structure L-N-AI-AII-BII-C. Minor differences between the four clones sequenced included a restriction site polymorphic for ApaI that may differentiate between alleles of the PSG-11 gene.

