The use of toxicogenomic data in risk assessment: a regulatory perspective

Vivian S W Chan1, Mette Due Theilade

  • 1Innovative Therapeutics Group, Centre for Drug Administration, Health Sciences Authority, Singapore. Vivian_CHAN@hsa.gov.sg

Insights

Genomic research advances toxicogenomics by linking gene expression to adverse effects. Robust toxicogenomics databases hold promise for drug safety assessment, pending validation of predictive value.

Area of Science:

  • Genomic research
  • Toxicology
  • Bioinformatics

Background:

  • Genomic research offers new insights into drug and xenobiotic toxicity mechanisms.
  • Numerous organizations are developing large toxicogenomics databases.
  • Linking gene expression patterns to specific toxicant effects is a key challenge.

Purpose of the Study:

  • To explore the potential of toxicogenomics databases in characterizing hazard.
  • To discuss the challenges and future directions in toxicogenomics research.
  • To examine the role of toxicogenomics data in regulatory decision-making for new drugs.

Main Methods:

  • Analysis of gene expression patterns.
  • Gene clustering techniques.
  • Database development and validation.

Main Results:

  • Toxicogenomics databases are expanding, offering potential for improved hazard characterization.
  • The robustness and predictive value of these databases are critical for future applications.
  • Regulatory bodies are exploring the use of toxicogenomics data, but cautiously.

Conclusions:

  • The future of toxicogenomics relies on the development of robust and reliable databases.
  • Regulatory use of toxicogenomics data in drug assessment will likely be case-by-case initially.
  • Further validation is needed to establish the predictive power of toxicogenomics databases.

Related Concept Videos

Toxicity Testing in Animals01:23

Toxicity Testing in Animals

Toxicity tests in animals are grounded on two main assumptions: first, the effects observed in laboratory animals can be extrapolated to humans, especially when adjusted for body surface area; second, high-dose exposure in animals is essential to identify potential human hazards from lower doses. This is based on the quantal dose-response concept, which faces the challenge of extrapolating results from relatively few test animals to much larger human populations. For example, a 0.01% incidence...
Toxicokinetics: Overview01:21

Toxicokinetics: Overview

Studies that assess how a drug is absorbed, distributed, metabolized, and excreted (ADME) at toxic doses are termed toxicokinetics. Understanding toxicokinetics helps predict adverse drug reactions (ADRs) and manage toxicity in humans.Toxicokinetics differs from pharmacokinetics mainly in the dose levels studied, with toxicokinetics focusing on higher toxic doses. The kinetics at these levels can be non-linear due to altered physiological processes. Toxicodynamics examines the relationship...
Drug Regulation01:25

Drug Regulation

Drug regulation encompasses the management of drug usage by evaluating its safety and efficacy through assessments conducted by regulatory authorities. Regrettably, the history of drug regulation is marred by several catastrophic events. One such incident is the Elixir Sulfanilamide tragedy, in which the toxic compound diethyl glycol was included in a sweet-tasting medication, leading to numerous fatalities. This event prompted the enactment of the Food, Drug, and Cosmetic Act in 1938. Under...
Pharmacogenomics: Identification of New Drug Targets01:29

Pharmacogenomics: Identification of New Drug Targets

Advances in genomics have profoundly influenced drug discovery by increasing both the speed and accuracy of pharmaceutical development. Pharmacogenomics, which examines how genetic variation influences drug response, facilitates the identification of novel therapeutic targets and enables patient stratification for personalized treatment. These strategies contribute to improved drug efficacy, minimized adverse effects, and more efficient clinical trial design.Mapping genetic differences...
Mutagenicity and Carcinogenicity01:25

Mutagenicity and Carcinogenicity

Mutagenicity and carcinogenicity refer to the ability of drugs to cause genetic defects and induce cancer, respectively. The International Agency for Research on Cancer (IARC) classifies agents into four groups based on their carcinogenic potential. Group 1 agents are known human carcinogens; group 2A agents are probably carcinogenic to humans; group 3 agents lack data to support their role in carcinogenesis; and group 4 includes agents for which data support that they are not likely to be...
Drug Toxicity: Dose-Dependent Reactions01:24

Drug Toxicity: Dose-Dependent Reactions

Drug toxicities can be stratified into pharmacological, pathological, or genotoxic based on their mechanisms. The incidence and severity of these toxicities generally increase with the drug's concentration in the body and exposure time.Pharmacological toxicity is evident when the therapeutic effects of drugs overshoot into adverse reactions in a predictable, dose-dependent manner. Central nervous system (CNS) depression from barbiturates is a classic example, with effects escalating from...