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Updated: Aug 18, 2026

Efficient and Scalable Production of Full-length Human Huntingtin Variants in Mammalian Cells using a Transient Expression System
Published on: December 10, 2021
Ancient origin of the CAG expansion causing Huntington disease in a Spanish population
Javier García-Planells1, Juan A Burguera, Pilar Solís
1Laboratory of Genetics and Medicine, Department of Genomics and Proteomics, Instituto de Biomedicina, CSIC, Valencia, Spain.
Insights
Huntington disease (HD) genetic history in Valencia suggests the primary mutation originated 4,700-10,000 years ago. Local founder effects influenced the CAG expansion
Area of Science:
- Genetics
- Neurodegenerative Disorders
- Population Genetics
Background:
- Huntington disease (HD) is an autosomal dominant neurodegenerative disorder caused by CAG trinucleotide repeat expansion in the huntingtin gene.
- The origin and spread of the HD mutation are thought to stem from a limited number of mutational events.
- Understanding the genetic history of HD is crucial for comprehending its global distribution and disease mechanisms.
Purpose of the Study:
- To investigate the genetic history and origin of the Huntington disease (HD) mutation in the Valencian population of Eastern Spain.
- To analyze the specific haplotypes associated with the HD mutation in this region.
- To estimate the age of the CAG expansion and identify potential founder effects.
Main Methods:
- Haplotype analysis of the HD/CCG repeat and flanking short tandem repeats (STRs) in 83 family probands.
- Segregation analysis and PHASE program for phase-known mutant chromosomes.
- Construction of extended haplotypes using STRs D4S106 and D4S3034.
Main Results:
- At least two main chromosomes associated with the HD mutation were identified in the Valencian population: one with allele 7 and another with allele 10.
- Haplotype A-7-A (H1) was the predominant haplotype, found in a large majority of mutant chromosomes analyzed.
- The CAG expansion associated with H1 was estimated to be between 4,700 and 10,000 years old.
- A non-homogenous distribution of extended haplotypes suggested local founder effects.
Conclusions:
- The Huntington disease (HD) mutation in the Valencian population is primarily associated with a specific ancestral haplotype (H1).
- The estimated age of the CAG expansion points to an ancient origin, potentially predating the establishment of distinct regional populations.
- Evidence of local founder effects indicates that demographic events have shaped the distribution of HD haplotypes within the region.
Abstract:
Huntington disease (HD) is an autosomal dominant neurodegenerative disorder characterized clinically by progressive motor impairment, cognitive decline, and emotional deterioration. The disease is caused by the abnormal expansion of a CAG trinucleotide repeat in the first exon of the huntingtin gene in chromosome 4p16.3. HD is spread worldwide and it is generally accepted that few mutational events account for the origin of the pathogenic CAG expansion in most populations. We have investigated the genetic history of HD mutation in 83 family probands from the Land of Valencia, in Eastern Spain. An analysis of the HD/CCG repeat in informative families suggested that at least two main chromosomes were associated in the Valencian population, one associated with allele 7 (77 mutant chromosomes) and one associated with allele 10 (two mutant chromosomes). Haplotype A-7-A (H1) was observed in 47 out of 48 phase-known mutant chromosomes, obtained by segregation analysis, through the haplotype analysis of rs1313770-HD/CCG-rs82334, as it also was in 120 out of 166 chromosomes constructed by means of the PHASE program. The genetic history and geographical distribution of the main haplotype H1 were both studied by constructing extended haplotypes with flanking short tandem repeats (STRs) D4S106 and D4S3034. We found that we were able to determine the age of the CAG expansion associated with the haplotype H1 as being between 4,700 and 10,000 years ago. Furthermore, we observed a nonhomogenous distribution in the different regions associated with the different extended haplotypes of the ancestral haplotype H1, suggesting that local founder effects have occurred.
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