Related Experiment Video
Updated: Aug 18, 2026

Computational Prediction of Amino Acid Preferences of Potentially Multispecific Peptide-Binding Domains Involved in Protein-Protein Interactions
Published on: January 26, 2024
Meta-DP: domain prediction meta-server
Harpreet Kaur Saini1, Daniel Fischer
1Center of Excellence in Bioinformatics and Department of Computer Science and Engineering, University at Buffalo, 901 Washington Street, Suite 300, Buffalo, NY 14203, USA. hkaur@bioinformatics.buffalo.edu
Unlabelled:
Meta-DP, a domain prediction meta-server provides a simple interface to predict domains in a given protein sequence using a number of domain prediction methods. The Meta-DP is a convenient resource because through accessing a single site, users automatically obtain the results of the various domain prediction methods along with a consensus prediction. The Meta-DP is currently coupled to 10 domain prediction servers and can be extended to include any number of methods. Meta-DP can thus become a centralized repository of available methods. Meta-DP was also used to evaluate the performance of 13 domain prediction methods in the context of CAFASP-DP.
Availability:
The Meta-DP server is freely available at http://meta-dp.bioinformatics.buffalo.edu and the CAFASP-DP evaluation results are available at http://cafasp4.bioinformatics.buffalo.edu/dp/update.html
Contact:
hkaur@bioinformatics.buffalo.edu
Supplementary Information:
Available at http://cafasp4.bioinformatics.buffalo.edu/dp/update.html.
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