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Updated: Aug 18, 2026

Protein Membrane Overlay Assay: A Protocol to Test Interaction Between Soluble and Insoluble Proteins in vitro
Published on: August 14, 2011
Biochemical characterization of rous sarcoma virus MA protein interaction with membranes
Amanda K Dalton1, Paul S Murray, Diana Murray
1Department of Molecular Biology and Genetics, Cornell University, 360 Biotechnology Building, Ithaca, NY 14853, USA.
Abstract:
The MA domain of retroviral Gag proteins mediates association with the host cell membrane during assembly. The biochemical nature of this interaction is not well understood. We have used an in vitro flotation assay to directly measure Rous sarcoma virus (RSV) MA-membrane interaction in the absence of host cell factors. The association of purified MA and MA-containing proteins with liposomes of defined composition was electrostatic in nature and depended upon the presence of a biologically relevant concentration of negatively charged lipids. A mutant MA protein known to be unable to promote Gag membrane association and budding in vivo failed to bind to liposomes. These results were supported by computational modeling. The intrinsic affinity of RSV MA for negatively charged membranes appears insufficient to promote efficient plasma membrane binding during assembly. However, an artificially dimerized form of MA bound to liposomes by at least an order of magnitude more tightly than monomeric MA. This result suggests that the clustering of MA domains, via Gag-Gag interactions during virus assembly, drives membrane association in vivo.
Insights
Rous sarcoma virus MA protein binds to negatively charged lipids electrostatically. MA domain clustering, not intrinsic affinity, drives virus assembly at the host cell membrane.
Area of Science:
- Virology
- Molecular Biology
- Biochemistry
Background:
- The MA domain of retroviral Gag proteins is crucial for virus assembly at the host cell membrane.
- The precise biochemical mechanisms governing MA-membrane interactions remain poorly understood.
Purpose of the Study:
- To investigate the in vitro biophysical properties of Rous sarcoma virus (RSV) MA domain-membrane interactions.
- To elucidate the role of electrostatic forces and lipid composition in MA-membrane binding.
Main Methods:
- In vitro liposome flotation assays using purified MA proteins.
- Liposomes with defined lipid compositions were employed.
- Computational modeling was used to support experimental findings.
Main Results:
- RSV MA protein association with liposomes is electrostatic, requiring negatively charged lipids.
- A mutant MA protein defective in vivo also failed to bind liposomes.
- Monomeric MA showed weak membrane affinity, while artificially dimerized MA exhibited significantly higher binding affinity.
Conclusions:
- The intrinsic affinity of monomeric RSV MA for negatively charged membranes is insufficient for efficient plasma membrane association during assembly.
- Clustering of MA domains, facilitated by Gag-Gag interactions during virus assembly, likely drives the strong membrane association observed in vivo.
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