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Updated: Aug 17, 2026

Identification of RNA Fragments Resulting from Enzymatic Degradation using MALDI-TOF Mass Spectrometry
Published on: April 11, 2022
2',5'-Oligoadenylate size is critical to protect RNase L against proteolytic cleavage in chronic fatigue syndrome
Marc Frémont1, Karim El Bakkouri, Freya Vaeyens
1RED Laboratories, Pontbeek 61, B-1731 Zellik, Belgium.
Abstract:
A dysregulation in the 2',5'-oligoadenylate (2-5A)-dependent RNase L antiviral pathway has been detected in peripheral blood mononuclear cells (PBMC) of chronic fatigue syndrome (CFS) patients, which is characterized by upregulated 2-5A synthetase and RNase L activities, as well as by the presence of a low molecular weight (LMW) 2-5A-binding protein of 37-kDa related to RNase L. This truncated protein has been shown to originate from proteolytic cleavage of the native 83-kDa RNase L by m-calpain and human leukocyte elastase (HLE). We investigated the possible role of 2-5A oligomers in the proteolytic action toward the endonuclease and show that incubation of CFS PBMC extracts with 2-5A trimer and tetramer, but not with the dimer, results in a significant protection of the native 83-kDa RNase L against cleavage by endogenous and purified proteases. Similar results are obtained with a purified recombinant RNase L. An analysis of the size of 2-5A oligomers produced by the catalytic activity of the 2-5A synthetase present in PBMC extracts further shows that samples containing the 37-kDa RNase L preferentially produce 2-5A dimers instead of higher oligomers. Taken together, our results indicate that homodimerization of RNase L by 2-5A oligomers higher than the dimer prevents its cleavage by proteolytic enzymes. The presence of the truncated 37-kDa RNase L in PBMC extracts is therefore likely to result, not only from the abnormal activation of inflammatory proteases, but also from a dysregulation in 2-5A synthetase induction or activation towards the preferential production of 2-5A dimers.
Insights
Chronic fatigue syndrome (CFS) involves a faulty antiviral pathway. Higher 2-5A oligomers protect RNase L from cleavage, while dimers indicate pathway dysregulation in CFS patients.
Area of Science:
- Immunology
- Molecular Biology
- Virology
Background:
- Dysregulation of the 2',5'-oligoadenylate (2-5A)-dependent RNase L pathway is observed in chronic fatigue syndrome (CFS).
- CFS patients exhibit increased 2-5A synthetase and RNase L activity, alongside a 37-kDa truncated RNase L protein.
- This truncated protein results from m-calpain and human leukocyte elastase (HLE) cleavage of the 83-kDa native RNase L.
Purpose of the Study:
- To investigate the role of 2-5A oligomers in the proteolytic cleavage of RNase L.
- To understand the implications of 2-5A oligomer production in CFS pathogenesis.
Main Methods:
- Incubation of CFS peripheral blood mononuclear cell (PBMC) extracts with various 2-5A oligomers (dimer, trimer, tetramer).
- Analysis of RNase L cleavage in the presence of endogenous and purified proteases.
- Assessment of 2-5A oligomer sizes produced by PBMC extracts using 2-5A synthetase activity.
Main Results:
- 2-5A trimers and tetramers, but not dimers, protected native 83-kDa RNase L from proteolytic cleavage.
- Purified recombinant RNase L showed similar protection with higher-order 2-5A oligomers.
- CFS samples with 37-kDa RNase L preferentially produced 2-5A dimers, unlike higher oligomers.
Conclusions:
- Homodimerization of RNase L by 2-5A oligomers (trimer/tetramer) prevents its proteolytic degradation.
- The presence of truncated 37-kDa RNase L in CFS likely stems from both protease activation and a shift towards 2-5A dimer production by 2-5A synthetase.
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