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Updated: Aug 11, 2026

In vivo Interrogation of Central Nervous System Translatome by Polyribosome Fractionation
Published on: April 30, 2014
mRNA with a <20-nt poly(A) tail imparted by the poly(A)-limiting element is translated as efficiently in vivo as long
Jing Peng1, Daniel R Schoenberg
1Department of Molecular and Cellular Biochemistry, The Ohio State University, 1645 Neil Ave., Columbus, OH 43210-1218, USA.
Abstract:
The poly(A)-limiting element (PLE) is a conserved sequence that restricts the length of the poly(A) tail to <20 nt. This study compared the translation of PLE-containing short poly(A) mRNA expressed in cells with translation in vitro of mRNAs with varying length poly(A) tails. In transfected cells, PLE-containing mRNA had a <20-nt poly(A) and accumulated to a level 20% higher than a matching control without a PLE. It was translated as well as the matching control mRNA with long poly(A) and showed equivalent binding to polysomes. Translation in a HeLa cell cytoplasmic extract was used to examine the impact of the PLE in the context of varying length poly(A) tails. Here the overall translation of +PLE mRNA was less than control mRNA with the same length poly(A), and the PLE did not overcome the effect of a short poly(A) tail. Because poly(A)-binding protein (PABP) is a dominant effector of poly(A)-dependent translation we reasoned excess PABP in our extract might overwhelm PLE regulation of translation. This was confirmed by experiments where PABP was inactivated with poly(rA) or Paip2, and the effect of both treatments was reversed by addition of recombinant PABP. These data indicate that the PLE functionally substitutes for bound PABP to stimulate translation of short poly(A) mRNA.
Insights
The poly(A)-limiting element (PLE) restricts poly(A) tail length. It enhances translation of short poly(A) mRNA by substituting for poly(A)-binding protein (PABP) in cells.
Area of Science:
- Molecular Biology
- Gene Regulation
- mRNA Metabolism
Background:
- The poly(A) tail length is crucial for mRNA stability and translation efficiency.
- The poly(A)-limiting element (PLE) is a conserved sequence element that limits poly(A) tail length to less than 20 nucleotides.
- Poly(A)-binding protein (PABP) plays a key role in poly(A)-dependent translation.
Purpose of the Study:
- To investigate the impact of the poly(A)-limiting element (PLE) on mRNA translation.
- To compare the translation of PLE-containing mRNA with varying poly(A) tail lengths in different cellular contexts.
- To elucidate the mechanism by which PLE influences translation, particularly in relation to PABP.
Main Methods:
- Transfection of cells with PLE-containing and control mRNA.
- In vitro translation assays using HeLa cell cytoplasmic extracts.
- Manipulation of poly(A)-binding protein (PABP) levels and activity using poly(rA) and Paip2.
- Analysis of mRNA accumulation, translation efficiency, and polysome binding.
Main Results:
- In transfected cells, PLE-containing mRNA with short poly(A) tails accumulated 20% higher and translated as well as control mRNA with long poly(A) tails.
- In vitro, PLE-containing mRNA showed reduced translation compared to controls with similar poly(A) tail lengths, indicating PLE did not overcome short poly(A) effects alone.
- In vitro translation was enhanced when PABP activity was reduced (using poly(rA) or Paip2), and this effect was reversed by adding recombinant PABP, suggesting PLE acts by substituting for PABP.
Conclusions:
- The poly(A)-limiting element (PLE) can enhance the translation of short poly(A) mRNA.
- PLE's stimulatory effect on short poly(A) mRNA translation is dependent on the cellular context and PABP levels.
- PLE appears to functionally substitute for PABP, thereby promoting the translation of mRNAs with limited poly(A) tail lengths.
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