Poly(C) binding protein family is a transcription factor in mu-opioid receptor gene expression

Sung-Su Kim1, Krishan K Pandey, Hack Sun Choi

  • 1Department of Pharmacology, University of Minnesota Medical School, 6-120 Jackson Hall, 321 Church St. SE, Minneapolis, MN 55455, USA. kimxx558@umn.edu

Insights

Poly(C) binding proteins (PCBPs) interact with the mouse mu-opioid receptor (MOR) gene's promoter, activating MOR transcription. These transcription factors enhance MOR gene expression in NMB cells.

Area of Science:

  • Molecular Biology
  • Neuroscience
  • Gene Regulation

Background:

  • The mouse mu-opioid receptor (MOR) gene possesses two promoters: distal and proximal.
  • A previously identified 26-base pair (bp) cis-acting element in the mouse MOR gene activates MOR gene expression.

Purpose of the Study:

  • To identify proteins interacting with the 26-bp polypyrimidine stretch in the MOR proximal promoter.
  • To elucidate the role of these interacting proteins in regulating MOR gene transcription.

Main Methods:

  • Cloning of four poly(C) binding protein (PCBP) family members.
  • Nuclear run-off assays and semiquantitative RT-PCR to assess transcription rates.
  • Chromatin immunoprecipitation assays to confirm in vivo interactions.

Main Results:

  • Four PCBP family members were cloned and shown to interact with the 26-bp polypyrimidine stretch in the MOR proximal promoter.
  • PCBPs bind to both single- and double-stranded DNA, enhancing MOR gene transcription rates.
  • Refined mapping identified a core region (-317/-304) crucial for PCBP-induced MOR promoter activity, confirmed by decoy oligonucleotides.

Conclusions:

  • Poly(C) binding proteins (PCBPs) function as transcription factors that positively regulate mouse mu-opioid receptor (MOR) gene expression.
  • The interaction between PCBPs and the MOR promoter is essential for MOR gene transcription in NMB cells.

Related Concept Videos

Master Transcription Regulators02:23

Master Transcription Regulators

Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
Cooperative Binding of Transcription Regulators02:13

Cooperative Binding of Transcription Regulators

Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome.  Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form dimers that...
Cooperative Binding of Transcription Regulators02:13

Cooperative Binding of Transcription Regulators

Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome.  Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form dimers that...
Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
Co-activators and Co-repressors02:04

Co-activators and Co-repressors

Gene transcription is regulated by the synergistic action of several proteins that form a complex at a gene regulatory site. This is observed in eukaryotes, where the regulation of gene expression is a complex process. Regulatory proteins in eukaryotes can broadly be classified into two types – regulators that bind directly to specific DNA sequences and co-regulators that associate with regulatory proteins but cannot directly bind to the DNA. These co-regulators are further divided into...