Related Experiment Video
Updated: Aug 17, 2026

Visualization of DNA Repair Proteins Interaction by Immunofluorescence
Published on: June 26, 2020
ATM activation and its recruitment to damaged DNA require binding to the C terminus of Nbs1
Zhongsheng You1, Charly Chahwan, Julie Bailis
1Molecular and Cell Biology Laboratory, The Salk Institute for Biological Studies, La Jolla, CA 92037, USA.
Abstract:
ATM has a central role in controlling the cellular responses to DNA damage. It and other phosphoinositide 3-kinase-related kinases (PIKKs) have giant helical HEAT repeat domains in their amino-terminal regions. The functions of these domains in PIKKs are not well understood. ATM activation in response to DNA damage appears to be regulated by the Mre11-Rad50-Nbs1 (MRN) complex, although the exact functional relationship between the MRN complex and ATM is uncertain. Here we show that two pairs of HEAT repeats in fission yeast ATM (Tel1) interact with an FXF/Y motif at the C terminus of Nbs1. This interaction resembles nucleoporin FXFG motif binding to HEAT repeats in importin-beta. Budding yeast Nbs1 (Xrs2) appears to have two FXF/Y motifs that interact with Tel1 (ATM). In Xenopus egg extracts, the C terminus of Nbs1 recruits ATM to damaged DNA, where it is subsequently autophosphorylated. This interaction is essential for ATM activation. A C-terminal 147-amino-acid fragment of Nbs1 that has the Mre11- and ATM-binding domains can restore ATM activation in an Nbs1-depleted extract. We conclude that an interaction between specific HEAT repeats in ATM and the C-terminal FXF/Y domain of Nbs1 is essential for ATM activation. We propose that conformational changes in the MRN complex that occur upon binding to damaged DNA are transmitted through the FXF/Y-HEAT interface to activate ATM. This interaction also retains active ATM at sites of DNA damage.
Insights
The DNA damage response protein ATM is activated by the MRN complex through a specific interaction between ATM
Area of Science:
- Molecular Biology
- Cellular Biology
- Biochemistry
Background:
- ATM (Ataxia-Telangiectasia Mutated) is crucial for DNA damage response.
- ATM and other PIKKs possess amino-terminal HEAT repeat domains with unclear functions.
- The Mre11-Rad50-Nbs1 (MRN) complex regulates ATM activation, but the precise mechanism is unknown.
Purpose of the Study:
- To elucidate the functional relationship between the MRN complex and ATM in DNA damage response.
- To investigate the role of HEAT repeat domains in ATM activation.
- To identify the specific interaction mediating ATM recruitment and activation at DNA damage sites.
Main Methods:
- Investigated interactions between fission yeast ATM (Tel1) HEAT repeats and Nbs1 C-terminal FXF/Y motifs.
- Utilized Xenopus egg extracts to study Nbs1's role in recruiting and activating ATM at damaged DNA.
- Assessed ATM activation in Nbs1-depleted extracts using a functional Nbs1 C-terminal fragment.
Main Results:
- Identified specific HEAT repeats in Tel1 (ATM) that bind to the C-terminal FXF/Y motif of Nbs1.
- Demonstrated that Nbs1 C-terminus recruits ATM to damaged DNA, leading to its autophosphorylation and activation.
- Showed that a minimal Nbs1 fragment containing Mre11- and ATM-binding domains restores ATM activation in depleted extracts.
Conclusions:
- The interaction between ATM HEAT repeats and the Nbs1 C-terminal FXF/Y domain is essential for ATM activation.
- Conformational changes in the MRN complex upon DNA binding are transmitted via the FXF/Y-HEAT interface to activate ATM.
- This interaction anchors active ATM at DNA damage sites, facilitating sustained DNA repair signaling.
Related Concept Videos
DNA Damage can Stall the Cell Cycle
DNA Damage Can Stall the Cell Cycle
Single-Strand DNA Binding Proteins
Homologous Recombination
Long-patch Base Excision Repair
Nucleotide Excision Repair

