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Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
Proteomic identification of differentially-expressed genes in human gastric carcinomas
Ryuichi Nishigaki1, Mitsuhiko Osaki, Masaharu Hiratsuka
1Department of Human Genome Science (Kirin Brewery), Graduate School of Medical Science, Tottori University, Nishi-cho 86, Yonago, Tottori 683-8503, Japan.
Abstract:
Although genetic alterations in proto-oncogenes, tumor-suppressor genes, cell cycle regulators, and cell growth factors have been implicated in the process of human gastric carcinogenesis, the principle carcinogenic mechanisms are not fully understood. In this study, we used a proteomic approach to search for genes that may be involved in gastric carcinogenesis and that might serve as diagnostic markers. We identified nine proteins with increased expression and 13 proteins with decreased expression in gastric carcinomas. The two most notable groups included proteins involved in mitotic checkpoint (MAD1L1 and EB1) and mitochondrial functions (CLPP, COX5A, and ECH1). This suggested that there are links between dysfunctions in these processes and gastric carcinogenesis. We also observed the differential expression of HSP27 and CYR61 proteins in gastric carcinoma, whose expression is known to be altered in other types of tumors. Furthermore, the study identified proteins whose function in gastric carcinomas was previously unsuspected and that may serve as new molecular markers for gastric carcinomas. Importantly, immunohistochemical analyses confirmed that the levels of expression of MAD1L1, HSP27, and CYR61 were altered in gastric carcinoma tissues. Therefore, our study suggested not only that the proteins identified in this study can be useful diagnostic markers but also that a proteomics-based approach is useful for developing a more complete picture of the pathogenesis and function of gastric carcinomas.
Insights
This study used proteomics to find new diagnostic markers for gastric cancer. Researchers identified specific proteins, including MAD1L1, HSP27, and CYR61, altered in tumors, aiding in understanding cancer development.
Area of Science:
- Proteomics
- Molecular biology
- Oncology
Background:
- Genetic alterations in proto-oncogenes, tumor-suppressor genes, cell cycle regulators, and growth factors are linked to gastric carcinogenesis.
- The precise carcinogenic mechanisms driving human gastric cancer remain incompletely understood.
Purpose of the Study:
- To employ a proteomic strategy to identify novel genes implicated in gastric carcinogenesis.
- To discover potential diagnostic markers for gastric carcinoma.
Main Methods:
- Proteomic analysis was conducted on gastric carcinoma tissues.
- Differential protein expression was assessed.
- Immunohistochemical analyses were performed to validate findings.
Main Results:
- Nine proteins showed increased expression, and 13 proteins exhibited decreased expression in gastric carcinomas.
- Notable protein groups involved in mitotic checkpoint (MAD1L1, EB1) and mitochondrial functions (CLPP, COX5A, ECH1) were identified.
- Differential expression of MAD1L1, HSP27, and CYR61 was confirmed in gastric carcinoma tissues.
Conclusions:
- The identified proteins, particularly MAD1L1, HSP27, and CYR61, show promise as diagnostic markers for gastric carcinoma.
- Proteomics offers a valuable approach for elucidating gastric carcinoma pathogenesis and identifying new molecular targets.
- Dysregulation of mitotic checkpoint and mitochondrial functions may play a significant role in gastric carcinogenesis.
