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Published on: July 16, 2008
Strain-specific morphologies of yeast prion amyloid fibrils
Ruben Diaz-Avalos1, Chih-Yen King, Joseph Wall
1Institute of Molecular Biophysics, Florida State University, Tallahassee, FL 32306-4380, USA. diaz@sb.fsu.edu
Abstract:
Mass per length (mpl) measurements on single amyloid fibrils that specifically propagate the [VH], [VK], and [VL] strains of the yeast prion [PSI] reveal unanticipated differences in their structures. Many fibrils have approximately 1.0 prion molecule per 4.7-A cross-beta repeat period, which is consistent with a self-replicating model built by parallel beta-sheet hydrogen-bonding of like prion peptide segments, but other fibrils are definitely heavier. The predominantly straight fibrils of the dominant [VH] strain have a bimodal mpl distribution, corresponding to components with approximately 1.0 and 1.2 prions per repeat. Fibrils of the weaker [VK] strain, which are almost all wavy, have a monodisperse mpl distribution with a mean of 1.15 prions per repeat. The recessive [VL] strain sample has approximately 1.05 prions per repeat in single fibrils and includes approximately 10% double fibrils, which are rare in the duplicate [VH] and [VK] samples. All of these samples were assembled from purified recombinant Sup35 prion protein by seeded growth on nuclei extracted from yeast bearing the three [PSI] strains. Infectious and noninfectious spontaneously assembled fibrils of the recombinant prion protein also display different heterogeneous morphologies. The strain-specific morphological differences we have observed directly confirm the structural prediction of the protein-only prion theory but do not have an obvious molecular explanation.
Insights
Structural differences in yeast prion [PSI] amyloid fibrils were found using mass per length measurements. These findings support the protein-only prion theory but require further molecular explanation.
Area of Science:
- Biochemistry
- Structural Biology
- Yeast Genetics
Background:
- The yeast prion [PSI] is propagated by amyloid fibrils formed from the Sup35 protein.
- Different strains of [PSI] exist, denoted as [VH], [VK], and [VL].
- The protein-only prion theory predicts specific structures for these prion strains.
Purpose of the Study:
- To investigate the structural differences between [VH], [VK], and [VL] yeast prion [PSI] amyloid fibrils.
- To assess whether observed structural variations align with the protein-only prion theory.
- To explore the molecular basis of strain-specific fibril morphology.
Main Methods:
- Mass per length (mpl) measurements were performed on single amyloid fibrils.
- Fibrils were assembled from purified recombinant Sup35 prion protein.
- Seeded growth was used with nuclei extracted from yeast bearing the three [PSI] strains.
Main Results:
- Amyloid fibrils exhibited unanticipated mass per length differences.
- [VH] strain fibrils showed a bimodal mpl distribution (1.0 and 1.2 prions/repeat).
- [VK] strain fibrils had a mean mpl of 1.15 prions/repeat, with wavy morphology.
- [VL] strain fibrils had a mean mpl of 1.05 prions/repeat and included double fibrils.
- Infectious and noninfectious fibrils displayed heterogeneous morphologies.
Conclusions:
- Observed strain-specific morphological differences in amyloid fibrils directly confirm structural predictions of the protein-only prion theory.
- The observed structural variations do not yet have a clear molecular explanation.
- Further research is needed to elucidate the molecular mechanisms underlying prion strain diversity.
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