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Updated: Aug 16, 2026

Quantitative Detection of DNA-Protein Crosslinks and Their Post-Translational Modifications
Published on: April 21, 2023
DNA repair factor XPC is modified by SUMO-1 and ubiquitin following UV irradiation
Qi-En Wang1, Qianzheng Zhu, Gulzar Wani
1Department of Radiology, The Ohio State University 103 Wiseman Hall, 400 W. 12th Avenue, Columbus, OH 43210, USA.
Abstract:
Nucleotide excision repair (NER) is the major DNA repair process that removes diverse DNA lesions including UV-induced photoproducts. There are more than 20 proteins involved in NER. Among them, XPC is thought to be one of the first proteins to recognize DNA damage during global genomic repair (GGR), a sub-pathway of NER. In order to study the mechanism through which XPC participates in GGR, we investigated the possible modifications of XPC protein upon UV irradiation in mammalian cells. Western blot analysis of cell lysates from UV-irradiated normal human fibroblast, prepared by direct boiling in an SDS lysis buffer, showed several anti-XPC antibody-reactive bands with molecular weight higher than the original XPC protein. The reciprocal immunoprecipitation and siRNA transfection analysis demonstrated that XPC protein is modified by SUMO-1 and ubiquitin. By using several NER-deficient cell lines, we found that DDB2 and XPA are required for UV-induced XPC modifications. Interestingly, both the inactivation of ubiquitylation and the treatment of proteasome inhibitors quantitatively inhibited the UV-induced XPC modifications. Furthermore, XPC protein is degraded significantly following UV irradiation in XP-A cells in which sumoylation of XPC does not occur. Taken together, we conclude that XPC protein is modified by SUMO-1 and ubiquitin following UV irradiation and these modifications require the functions of DDB2 and XPA, as well as the ubiquitin-proteasome system. Our results also suggest that at least one function of UV-induced XPC sumoylation is related to the stabilization of XPC protein.
Insights
UV radiation triggers modifications of the XPC protein, involving SUMO-1 and ubiquitin. These changes require DDB2 and XPA, and are linked to XPC protein stabilization and degradation.
Area of Science:
- Molecular biology
- DNA repair mechanisms
- Cellular response to UV radiation
Background:
- Nucleotide excision repair (NER) is crucial for removing DNA damage, particularly UV photoproducts.
- XPC protein initiates damage recognition in global genomic repair (GGR), a key NER sub-pathway.
- Understanding XPC modification is vital for elucidating its role in GGR.
Purpose of the Study:
- To investigate post-UV irradiation modifications of XPC protein in mammalian cells.
- To identify the specific types of modifications and the proteins involved.
- To determine the functional consequences of XPC modifications in DNA repair.
Main Methods:
- Western blot analysis of UV-irradiated human fibroblasts.
- Reciprocal immunoprecipitation and siRNA transfection.
- Analysis using NER-deficient cell lines (e.g., XP-A cells).
Main Results:
- UV irradiation induced higher molecular weight modifications of XPC protein.
- XPC protein is modified by SUMO-1 and ubiquitin post-UV irradiation.
- DDB2 and XPA are essential for UV-induced XPC modifications, which involve the ubiquitin-proteasome system.
- XPC sumoylation appears to stabilize the protein, while its absence leads to degradation in XP-A cells.
Conclusions:
- XPC protein undergoes SUMO-1 and ubiquitin modification following UV exposure.
- These modifications are dependent on DDB2, XPA, and the ubiquitin-proteasome system.
- UV-induced XPC sumoylation contributes to XPC protein stabilization during DNA repair.
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