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Identification of Mouse and Human Antibody Repertoires by Next-Generation Sequencing
Published on: March 15, 2019
The bovine antibody repertoire
Yaofeng Zhao1, Stephen M Jackson, Robert Aitken
1Division of Clinical Immunology, Department of Laboratory Medicine, Karolinska University Hospital at Huddinge, SE-14186 Stockholm, Sweden.
Cattle generate diverse antibody repertoires, including immunoglobulin D (IgD), through gene rearrangement. Bovine antibody heavy chains compensate for limited gene diversity with exceptionally long CDR3 sequences, though post-rearrangement diversification remains unclear.
Area of Science:
- Immunology
- Veterinary Science
- Genetics
Background:
- Cattle possess the genetic machinery to produce a full spectrum of immunoglobulin (Ig) classes, including IgD, via germline gene rearrangement.
- While immunoglobulin light chain (IgL) groupings are known, Ig heavy chain (IgH) diversity in cattle, like other livestock, is limited by the low number of participating variable heavy (VH) segments and their conserved sequences.
Purpose of the Study:
- To investigate the mechanisms of immunoglobulin diversity generation in cattle.
- To understand the role of gene rearrangement and post-rearrangement processes in shaping the bovine antibody repertoire.
- To highlight the need for reagents and recombinant technologies for studying B cell maturation and Ig responses in cattle.
Main Methods:
- Analysis of germline gene rearrangement for Ig classes.
- Examination of bovine VH segments and their sequences.
- Characterization of CDR3 sequences in bovine Ig heavy chains.
Main Results:
- Cattle can produce all Ig classes, including IgD, through gene rearrangement.
- Limited IgH diversity is observed due to a small number of VH segments and conserved sequences.
- Bovine Ig heavy chains exhibit unusually long CDR3 sequences, potentially compensating for limited VH diversity.
- Post-rearrangement diversification processes, including their location, timing, and triggers, remain poorly defined.
Conclusions:
- Bovine Ig repertoire diversity is influenced by both limited VDJ recombination and unique features like long CDR3 sequences.
- Further research is required to elucidate the mechanisms of post-rearrangement diversification in cattle.
- Development of specific reagents and application of antibody engineering are crucial for advancing our understanding of bovine B cell immunology and Ig responses.
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