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Isolation and Chemical Characterization of Lipid A from Gram-negative Bacteria
Published on: September 16, 2013
The lipid A palmitoyltransferase PagP: molecular mechanisms and role in bacterial pathogenesis
1Departments of Laboratory Medicine and Pathobiology, and Biochemistry, University of Toronto, Toronto, Ontario, M5S 1A8, Canada. russell.bishop@utoronto.ca
Abstract:
Palmitoylated lipid A can both protect pathogenic bacteria from host immune defences and attenuate the activation of those same defences through the TLR4 signal transduction pathway. A palmitate chain from a phospholipid is incorporated into lipid A by an outer membrane enzyme PagP, which is an 8-stranded antiparallel beta-barrel preceded by an amino-terminal amphipathic alpha-helix. The PagP barrel axis is tilted by 25 degrees with respect to the membrane normal. An interior hydrophobic pocket in the outer leaflet-exposed half of the molecule functions as a hydrocarbon ruler that allows the enzyme to distinguish palmitate from other acyl chains found in phospholipids. Internalization of a phospholipid palmitoyl group within the barrel appears to occur by lateral diffusion from the outer leaflet through non-hydrogen-bonded regions between beta-strands. The MsbA-dependent trafficking of lipids from the inner membrane to the outer membrane outer leaflet is necessary for lipid A palmitoylation in vivo. The mechanisms by which bacteria regulate pagP gene expression strikingly reflect the corresponding pathogenic lifestyle of the bacterium. Variations on PagP structure and function can be illustrated with the known homologues from Gram-negative bacteria, which include pathogens of humans and other mammals in addition to pathogens of insects and plants. The PagP enzyme is potentially a target for the development of anti-infective agents, a probe of outer membrane lipid asymmetry, and a tool for the synthesis of lipid A-based vaccine adjuvants and endotoxin antagonists.
Insights
Palmitoylated lipid A, modified by the PagP enzyme, helps bacteria evade host defenses. Understanding PagP
Area of Science:
- Microbiology
- Structural Biology
- Immunology
Background:
- Palmitoylated lipid A modulates bacterial defense evasion and host immune response via TLR4 signaling.
- The outer membrane enzyme PagP incorporates palmitate into lipid A.
Purpose of the Study:
- To elucidate the structure and function of the PagP enzyme.
- To understand the mechanism of lipid A palmitoylation.
- To explore PagP as a potential therapeutic target.
Main Methods:
- Structural analysis of the PagP enzyme (8-stranded antiparallel beta-barrel).
- Investigation of substrate specificity using a hydrophobic pocket as a "hydrocarbon ruler".
- Analysis of lipid trafficking (MsbA-dependent) for in vivo palmitoylation.
Main Results:
- PagP's structure facilitates palmitate discrimination from other acyl chains.
- Lipid internalization occurs via lateral diffusion through beta-strand interfaces.
- MsbA-dependent lipid transport is crucial for in vivo lipid A palmitoylation.
- PagP gene expression regulation correlates with bacterial pathogenicity.
Conclusions:
- PagP is a key enzyme in bacterial immune evasion and virulence.
- PagP structure and function vary across Gram-negative bacteria.
- PagP represents a potential target for anti-infective agents and a tool for vaccine development.
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