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Gene-targeted Random Mutagenesis to Select Heterochromatin-destabilizing Proteasome Mutants in Fission Yeast
Published on: May 15, 2018
Analysis of the spontaneous mutator phenotype associated with 20S proteasome deficiency in S. cerevisiae
Justyna McIntyre1, Agnieszka Podlaska, Adrianna Skoneczna
1Institute of Biochemistry and Biophysics, Polish Academy of Sciences, 02-106 Warsaw, Poland.
Abstract:
Besides its role as a major recycler of unfolded or otherwise damaged intracellular proteins, the 26S proteasome functions as a regulator of many vital cellular processes and is postulated as a target for antitumor drugs. It has previously been shown that dysfunction of the catalytic core of the 26S proteasome, the 20S proteasome, causes a moderate increase in the frequency of spontaneous mutations in yeast [A. Podlaska, J. McIntyre, A. Skoneczna, E. Sledziewska-Gojska, The link between proteasome activity and postreplication DNA repair in Saccharomyces cerevisiae. Mol. Microbiol. 49 (2003) 1321-1332]. Here we show the results of genetic analysis, which indicate that the mutator phenotype caused by the deletion of UMP1, encoding maturase of 20S proteasome, involves members of the RAD6 epistasis group. The great majority of mutations occurring spontaneously in yeast cells deficient in 20S proteasome function are connected with the unique Rad6/Rad18-dependent error-prone translesion DNA synthesis (TLS) requiring the activities of both TLS polymerases: Pol eta and Pol zeta. Our results suggest the involvement of proteasomal activity in the limitation of this unique error-prone TLS mechanism in wild-type cells. On the other hand, we found that the mutator phenotypes caused by deficiency in Rad18 and Rad6, are largely alleviated by defects in proteasome activities. Since the mutator phenotypes produced by deletion of RAD6 and RAD18 require Pol zeta and Siz1/Ubc9-dependent sumoylation of PCNA, our results suggest that proteasomal dysfunction limits sumoylation-dependent error-prone activity of Pol zeta. Taken together, our findings strongly support the idea that proteolytic activity is involved in modulating the balance between TLS mechanisms functioning during DNA replication in S. cerevisiae.
Insights
Proteasome dysfunction in yeast increases mutations via error-prone DNA repair. Proteasome activity normally limits this error-prone translesion synthesis (TLS), balancing DNA replication fidelity.
Area of Science:
- Cellular Biology
- Molecular Biology
- Genetics
Background:
- The 26S proteasome is crucial for protein recycling and cellular regulation, with potential as an antitumor drug target.
- Previous studies linked 20S proteasome dysfunction to increased mutation rates in yeast.
- The 20S proteasome is the catalytic core of the 26S proteasome.
Purpose of the Study:
- To investigate the genetic basis of the mutator phenotype in yeast cells lacking 20S proteasome function.
- To elucidate the role of proteasome activity in regulating error-prone DNA repair pathways, specifically translesion synthesis (TLS).
Main Methods:
- Genetic analysis of yeast strains with deletions in UMP1 (encoding 20S proteasome maturase) and RAD6/RAD18 genes.
- Assessment of spontaneous mutation frequencies and characterization of mutation types.
- Investigation of the involvement of TLS polymerases (Pol eta, Pol zeta) and PCNA sumoylation.
Main Results:
- Deletion of UMP1 leads to a mutator phenotype dependent on the RAD6 epistasis group.
- Most spontaneous mutations in 20S proteasome-deficient cells arise from Rad6/Rad18-dependent TLS, requiring Pol eta and Pol zeta.
- Proteasome dysfunction appears to limit error-prone TLS in wild-type cells.
- Defects in proteasome activity partially suppress mutator phenotypes caused by RAD6 or RAD18 deficiency.
- Proteasome dysfunction limits sumoylation-dependent error-prone activity of Pol zeta.
Conclusions:
- Proteasome activity plays a role in limiting error-prone translesion DNA synthesis (TLS) in Saccharomyces cerevisiae.
- Proteasome dysfunction shifts the balance towards error-prone TLS, increasing mutation rates.
- There is a complex interplay between proteasome function and DNA repair mechanisms, particularly TLS, influencing genome stability during DNA replication.

