Microsatellite instability (MSI) increases with age in normal somatic cells
Mary I Coolbaugh-Murphy1, Jingping Xu, Louis S Ramagli
1Department of Molecular Genetics, The University of Texas M.D. Anderson Cancer Center, 1515 Holcombe, Houston, TX 77030, USA.
Abstract:
Small pool PCR (SP-PCR) is a sensitive method for the detection and quantification of microsatellite instability (MSI) in somatic cells. Here we propose that mutant microsatellite fragments accumulate with age in normal somatic cells and that this increase in MSI can be quantified by SP-PCR. MSI at 6 microsatellite loci was determined by SP-PCR in PBL DNA from 17 "normal" blood bank donors. These individuals varied in age from 20 to 67 y/o. MSI phenotypes were plotted against age in a regression analyses. A positive slope indicated a correlation between age and MSI phenotype (p=0.0006). The mean weighted average mutant frequencies across all loci for all individuals in the age groups (0.009 for 20-30 y/o; 0.019 for 35-50 y/o; 0.034 for 60-70 y/o) were also significantly different from each other (p<0.01). A baseline for increases of MSI with age in human somatic cells was therefore begun and the effectiveness of SP-PCR to evaluate low, but significant, levels of MSI, established.
Insights
Microsatellite instability (MSI) increases with age in normal somatic cells. Small pool PCR (SP-PCR) effectively quantifies this age-related increase in MSI, establishing a baseline for somatic cell mutation accumulation.
Area of Science:
- Molecular Biology
- Genetics
- Aging Research
Background:
- Small pool PCR (SP-PCR) is a highly sensitive technique for detecting and quantifying microsatellite instability (MSI).
- Microsatellite instability is a known biomarker in cancer, but its role in normal aging somatic cells is less understood.
Purpose of the Study:
- To investigate the hypothesis that mutant microsatellite fragments accumulate with age in normal somatic cells.
- To establish whether this age-related increase in MSI can be reliably quantified using SP-PCR.
- To determine a baseline for MSI accumulation in human somatic cells over the lifespan.
Main Methods:
- MSI was assessed at six microsatellite loci using SP-PCR in DNA extracted from peripheral blood lymphocytes (PBL).
- The study cohort comprised 17 healthy blood bank donors aged 20 to 67 years.
- MSI phenotypes were analyzed against age using regression analysis to identify correlations.
Main Results:
- A significant positive correlation was observed between age and MSI phenotype (p=0.0006).
- Mean weighted average mutant frequencies across all loci showed significant differences between age groups (20-30, 35-50, and 60-70 years; p<0.01).
- The study demonstrated SP-PCR's effectiveness in evaluating low but significant levels of MSI.
Conclusions:
- Mutant microsatellite fragments accumulate with age in normal human somatic cells.
- SP-PCR is a validated method for quantifying age-related increases in MSI in somatic DNA.
- This study provides a foundational understanding of MSI accumulation during the aging process.
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