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Phosphorylation of Y14 modulates its interaction with proteins involved in mRNA metabolism and influences its
1Institute of Biomedical Sciences, Academia Sinica, Taipei 11529, Taiwan.
Abstract:
The multicomponent exon junction complex (EJC) is deposited on the spliced mRNA during pre-mRNA splicing and is implicated in several post-splicing events, including mRNA export, nonsense-mediated mRNA decay (NMD), and translation control. This report is the first to identify potential post-translational modifications of the EJC core component Y14. We demonstrate that Y14 is phosphorylated at its repeated arginine/serine (RS) dipeptides, likely by SR protein-specific kinases. Phosphorylation of Y14 abolished its interaction with EJC components as well as factors that function downstream of the EJC. A non-phosphorylatable Y14 mutant was equivalent to the wild-type protein with respect to its association with spliced mRNA and its ability in NMD activation, but the mutant sequestered EJC and NMD factors on ribosome-containing mRNA ribonucleoproteins (mRNPs). We therefore hypothesize that phosphorylation of Y14 occurs upon completion of mRNA surveillance, leading to dissociation of Y14 from ribosome-containing mRNPs. Moreover, we found that Y14 is possibly methylated at multiple arginine residues in the carboxyl-terminal domain and that methylation of Y14 was antagonized by phosphorylation of RS dipeptides. This study reveals antagonistic post-translational modifications of Y14 that may be involved in the remodeling of Y14-containing mRNPs.
Insights
Phosphorylation of Y14, an exon junction complex (EJC) component, disrupts its interactions, impacting mRNA surveillance. Methylation and phosphorylation of Y14 show antagonistic regulation, suggesting roles in remodeling messenger ribonucleoproteins (mRNPs).
Area of Science:
- Molecular Biology
- RNA Biology
- Post-translational Modifications
Background:
- The exon junction complex (EJC) is crucial for post-splicing mRNA processing, including export, nonsense-mediated mRNA decay (NMD), and translation control.
- Y14 is a core component of the EJC, playing a significant role in these post-splicing events.
Purpose of the Study:
- To identify and characterize post-translational modifications of the EJC core component Y14.
- To investigate the functional consequences of Y14 phosphorylation and methylation on EJC assembly and function.
Main Methods:
- Analysis of Y14 phosphorylation at arginine/serine (RS) dipeptides using biochemical assays.
- Characterization of a non-phosphorylatable Y14 mutant in association with spliced mRNA and NMD activation.
- Investigation of Y14 methylation in the carboxyl-terminal domain and its interplay with phosphorylation.
Main Results:
- Y14 is phosphorylated at RS dipeptides, likely by SR protein-specific kinases, which abolishes its interaction with EJC components and downstream factors.
- A non-phosphorylatable Y14 mutant associates with spliced mRNA and activates NMD but sequesters EJC and NMD factors on ribosome-containing mRNPs.
- Y14 methylation occurs at multiple arginine residues and is antagonized by RS dipeptide phosphorylation, suggesting coordinated regulation.
Conclusions:
- Y14 phosphorylation likely facilitates the dissociation of Y14 from ribosome-containing mRNPs after mRNA surveillance completion.
- Antagonistic post-translational modifications (phosphorylation and methylation) of Y14 may regulate the remodeling of Y14-containing mRNPs.
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