Related Experiment Video
Updated: Aug 16, 2026

09:07
Detecting the Ligand-binding Domain Dimerization Activity of Estrogen Receptor Alpha Using the Mammalian Two-Hybrid Assay
Published on: December 19, 2018
DNA recognition by the oestrogen receptor: from solution to the crystal
J W Schwabe1, L Chapman, J T Finch
1MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 2QH, UK.
Structure (London, England : 1993)
|November 15, 1993
Summary
The estrogen receptor DNA-binding domain (ERDBD) binds DNA cooperatively. Specific disordered regions become ordered upon DNA binding, facilitating dimer formation and enhancing sequence recognition.
Area of Science:
- Molecular Biology
- Structural Biology
- Genetics
Background:
- Steroid/nuclear hormone receptors are transcription factors regulating gene expression.
- They bind DNA response elements as dimers, recognizing specific sequences.
- A conserved DNA-binding domain mediates this recognition.
Purpose of the Study:
- To characterize the DNA-binding properties of the estrogen receptor DNA-binding domain (ERDBD).
- To determine the refined NMR structure of the ERDBD.
- To elucidate the mechanism of ERDBD DNA recognition and binding cooperativity.
Main Methods:
- Nuclear Magnetic Resonance (NMR) spectroscopy to determine the solution structure of ERDBD.
- Analysis of DNA-binding properties and cooperativity.
- Comparison with existing X-ray crystallographic data.
Main Results:
- The isolated ERDBD is monomeric in solution.
- Two ERDBD molecules bind DNA cooperatively to specific sequences.
- Disordered regions in the solution structure become ordered upon DNA binding, forming a dimer interface.
Conclusions:
- Cooperative DNA binding by ERDBD is crucial for its function.
- Ordered internal residues mediate DNA contact and dimer formation.
- These findings explain how ERDBD achieves specific DNA recognition through cooperative dimerization.
Related Concept Videos
Determination of Crystal Structures
In the late 1800s, the revelation that light extended beyond visible wavelengths led to the discovery of X-rays by Wilhelm Roentgen. Recognized as high-energy electromagnetic radiation with short wavelengths, X-rays prompted exploration into their interaction with crystals. Max von Laue proposed in 1912 that the periodic arrangement of atoms, ions, or molecules in crystals would cause them to diffract X-rays, a hypothesis confirmed through experiments with copper sulfate and zinc sulfide...
X-ray Crystallography
The size of the unit cell and the arrangement of atoms in a crystal may be determined from measurements of the diffraction of X-rays by the crystal, termed X-ray crystallography.
Diffraction
Diffraction is the change in the direction of travel experienced by an electromagnetic wave when it encounters a physical barrier whose dimensions are comparable to those of the wavelength of the light. X-rays are electromagnetic radiation with wavelengths about as long as the distance between neighboring...
Diffraction
Diffraction is the change in the direction of travel experienced by an electromagnetic wave when it encounters a physical barrier whose dimensions are comparable to those of the wavelength of the light. X-rays are electromagnetic radiation with wavelengths about as long as the distance between neighboring...
X-ray Diffraction of Biological Samples
X-ray diffraction or XRD is an analytical tool that utilizes X-rays to study ordered structures such as crystalline organic and inorganic samples, polycrystalline materials, proteins, carbohydrates, and drugs.
According to Bragg's law, when X-rays strike the sample positioned on a stage, the rays are scattered by the electron clouds around the sample atoms. The X-ray diffraction or scattering is caused by constructive interference of the X-ray waves that reflect off the internal crystal...
According to Bragg's law, when X-rays strike the sample positioned on a stage, the rays are scattered by the electron clouds around the sample atoms. The X-ray diffraction or scattering is caused by constructive interference of the X-ray waves that reflect off the internal crystal...
Transducer Mechanism: Nuclear Receptors
Nuclear receptors, or NRs, are unique transcription factors that regulate gene transcription and affect the cellular pathways involved in reproduction, development, or metabolism. Their ability to be stimulated by small lipophilic ligands and control vital cellular processes makes them ideal drug targets. Nearly 10-15% of currently prescribed drugs target these receptors.
About 48 different soluble family members of nuclear receptors are identified that can be divided into two main classes:
About 48 different soluble family members of nuclear receptors are identified that can be divided into two main classes:
