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Updated: Aug 16, 2026

Determining Membrane Protein Topology Using Fluorescence Protease Protection (FPP)
Published on: April 20, 2015
CD74 is a member of the regulated intramembrane proteolysis-processed protein family
Shirly Becker-Herman1, Galit Arie, Helena Medvedovsky
1Department of Immunology, Weizmann Institute of Science, 76100 Rehovot, Israel.
Abstract:
Quite a few regulatory proteins, including transcription factors, are normally maintained in a dormant state to be activated after internal or environmental cues. Recently, a novel strategy, requiring proteolytic cleavage, was described for the mobilization of dormant transcription factors. These transcription factors are initially synthesized in an inactive form, whereas "nesting" in integral membrane precursor proteins. After a cleavage event, these new active factors are released from the membrane and can migrate into the nucleus to drive regulated gene transcription. This mechanism, regulated intramembrane proteolysis (RIP), controls diverse biological processes in prokaryotes and eukaryotes in response to a variety of signals. The MHC class II chaperone, CD74 (invariant chain, Ii), was previously shown to function as a signaling molecule in several pathways. Recently, we demonstrated that after intramembranal cleavage, the CD74 cytosolic fragment (CD74-ICD) is released and induces activation of transcription mediated by the NF-kappaB p65/RelA homodimer and the B-cell-enriched coactivator, TAF(II)105. Here, we add CD74 to the growing family of RIP-processed proteins. Our studies show that CD74 ectodomain must be processed in the endocytic compartments to allow its intramembrane cleavage that liberates CD74 intracellular domain (CD74-ICD). We demonstrate that CD74-ICD translocates to the nucleus and induces the activation of the p65 member of NF-kappaB in this compartment.
Insights
Regulatory proteins like transcription factors are activated by cleavage. CD74 (invariant chain, Ii) undergoes regulated intramembrane proteolysis (RIP), releasing an active fragment that triggers gene transcription via NF-kappaB.
Area of Science:
- Molecular Biology
- Cell Signaling
- Protein Regulation
Background:
- Regulatory proteins, including transcription factors, are often kept dormant until activated by specific cues.
- A novel mechanism involves proteolytic cleavage to mobilize dormant transcription factors, which are initially bound to membrane proteins.
- This process, known as regulated intramembrane proteolysis (RIP), is crucial for various biological processes in both prokaryotes and eukaryotes.
Purpose of the Study:
- To investigate the role of CD74 (invariant chain, Ii) in regulated intramembrane proteolysis (RIP).
- To determine how CD74 processing leads to the activation of transcription factors.
- To elucidate the signaling pathway initiated by the intracellular domain of CD74.
Main Methods:
- Analysis of CD74 processing within endocytic compartments.
- Detection of CD74 intramembrane cleavage and release of its intracellular domain (CD74-ICD).
- Nuclear translocation studies of CD74-ICD and its effect on transcription factor activation.
Main Results:
- CD74 ectodomain processing in endocytic compartments is necessary for its intramembrane cleavage.
- Intramembrane cleavage liberates the CD74 intracellular domain (CD74-ICD).
- CD74-ICD translocates to the nucleus and activates the p65 subunit of NF-kappaB, mediating gene transcription.
Conclusions:
- CD74 is a novel member of the regulated intramembrane proteolysis (RIP)-processed protein family.
- The CD74 signaling pathway involves nuclear translocation of CD74-ICD to activate NF-kappaB.
- This mechanism highlights a new pathway for regulating gene transcription through membrane protein processing.
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