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Lymphocyte-specific protein tyrosine kinase is a novel risk gene for Alzheimer disease
Wangtao Zhong1, Hidehisa D Yamagata, Keiko Taguchi
1Department of Geriatric Medicine, Ehime University School of Medicine, Ehime, Japan.
Abstract:
Lymphocyte-specific protein tyrosine kinase (LCK) is a lymphoid-specific, Src family protein tyrosine kinase that is known to play a pivotal role in T-cell activation and interact with the T-cell coreceptors, CD4 and CD8. It has been shown to be significantly down-regulated in Alzheimer disease (AD) hippocampus compared with non-demented controls. Furthermore, it is located in a previously identified genetic linkage region (1p34-36) associated with AD. Therefore, we consider it to be a candidate gene for AD. We examined the relationship between AD and the LCK and apolipoprotein E (APOE) genes in 376 AD (including 323 late-onset AD (LOAD) cases and 53 early-onset AD (EOAD) cases) and 378 non-demented controls using a single nucleotide polymorphism (SNP). The polymorphism in intron 1 (+6424 A/G) was significantly associated with AD risk. The odds ratio (OR) for total AD associated with the GG genotype was 1.41 (95% CI=1.06-1.87) and that for LOAD was 1.37 (95%CI=1.02-1.85), while that for APOE-epsilon4 was 5.06 (95% CI=3.60-7.12). In the APOE-epsilon4 non-carrier subgroup, the GG genotype also showed significant association (OR=1.66; 95% CI=1.16-2.38). These results indicate that the LCK is a novel risk gene for AD regardless of the APOE genotype.
Insights
Lymphocyte-specific protein tyrosine kinase (LCK) is a novel Alzheimer disease (AD) risk gene. A specific LCK gene variant (GG genotype) increases AD risk, independent of apolipoprotein E (APOE) status.
Area of Science:
- Neuroscience
- Genetics
- Immunology
Background:
- Lymphocyte-specific protein tyrosine kinase (LCK) is crucial for T-cell activation.
- LCK is downregulated in Alzheimer disease (AD) hippocampus and located in an AD-associated genetic region.
- LCK is a potential candidate gene for AD due to its biological role and genetic linkage.
Purpose of the Study:
- To investigate the association between LCK gene polymorphisms and AD risk.
- To examine the relationship between LCK, apolipoprotein E (APOE), and AD in a case-control study.
Main Methods:
- Genotyping of a single nucleotide polymorphism (SNP) in LCK intron 1 (+6424 A/G).
- Analysis included 376 AD patients (LOAD and EOAD) and 378 non-demented controls.
- Statistical analysis included odds ratios (OR) and confidence intervals (CI), considering APOE genotype.
Main Results:
- The LCK +6424 A/G polymorphism (GG genotype) was significantly associated with increased AD risk (OR=1.41 for total AD, OR=1.37 for LOAD).
- APOE-epsilon4 significantly increased AD risk (OR=5.06).
- The GG genotype of LCK remained a significant risk factor for AD even in APOE-epsilon4 non-carriers (OR=1.66).
Conclusions:
- LCK represents a novel genetic risk factor for Alzheimer disease.
- The identified LCK polymorphism contributes to AD susceptibility independently of APOE genotype.
- These findings highlight LCK's potential role in AD pathogenesis.
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