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Assays for the Degradation of Misfolded Proteins in Cells
Published on: August 28, 2016
Pml39, a novel protein of the nuclear periphery required for nuclear retention of improper messenger
Benoît Palancade1, Michela Zuccolo, Sophie Loeillet
1Pores Nucléaires et Transport Nucléocytoplasmique, Unité Mixte de Recherche 144 Centre National de la Recherche Scientifique, Paris Cedex, France. palancad@curie.fr
Abstract:
Using a genetic screen, we have identified a previously uncharacterized Saccharomyces cerevisiae open reading frame (renamed PML39) that displays a specific interaction with nucleoporins of the Nup84 complex. Localization of a Pml39-green fluorescent protein (GFP) fusion and two-hybrid studies revealed that Pml39 is mainly docked to a subset of nuclear pore complexes opposite to the nucleolus through interactions with Mlp1 and Mlp2. The absence of Pml39 leads to a specific leakage of unspliced mRNAs that is not enhanced upon MLP1 deletion. In addition, overexpression of PML39-GFP induces a specific trapping of mRNAs transcribed from an intron-containing reporter and of the heterogenous nuclear ribonucleoprotein Nab2 within discrete nuclear domains. In a nup60delta mutant, Pml39 is mislocalized together with Mlp1 and Mlp2 in intranuclear foci that also recruit Nab2. Moreover, pml39delta partially rescues the thermosensitive phenotypes of messenger ribonucleoparticles (mRNPs) assembly mutants, indicating that PML39 deletion also bypasses the requirement for normally assembled mRNPs. Together, these data indicate that Pml39 is an upstream effector of the Mlps, involved in the retention of improper mRNPs in the nucleus before their export.
Insights
We discovered PML39, a protein that interacts with nuclear pore complexes in yeast. PML39 retains improperly assembled messenger ribonucleoparticles (mRNPs) in the nucleus, preventing their export.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- The nuclear pore complex (NPC) regulates transport between the nucleus and cytoplasm.
- Messenger ribonucleoparticles (mRNPs) must be properly assembled for efficient nuclear export.
- Proteins interacting with NPCs and mRNPs are crucial for nuclear export control.
Purpose of the Study:
- To characterize a novel Saccharomyces cerevisiae protein, PML39, and its role in nuclear export.
- To elucidate the interaction of PML39 with nucleoporins and its function in mRNP retention.
Main Methods:
- Genetic screening in Saccharomyces cerevisiae.
- Localization studies using Pml39-green fluorescent protein (GFP) fusions.
- Yeast two-hybrid assays.
- Analysis of mutant phenotypes (e.g., nup60delta, pml39delta).
Main Results:
- PML39 interacts with nucleoporins Mlp1 and Mlp2 at specific nuclear pore complexes.
- Deletion of PML39 causes leakage of unspliced mRNAs.
- Overexpression of PML39 traps intron-containing mRNAs and Nab2 in nuclear domains.
- PML39 deletion partially rescues thermosensitive mRNP assembly mutants.
Conclusions:
- PML39 acts as an upstream effector of Mlp1 and Mlp2.
- PML39 is involved in retaining improperly assembled mRNPs in the nucleus.
- PML39 plays a critical role in nuclear export quality control.
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