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Measurement of Vacuolar and Cytosolic pH In Vivo in Yeast Cell Suspensions
Published on: April 19, 2013
Regulated cell-to-cell variation in a cell-fate decision system
Alejandro Colman-Lerner1, Andrew Gordon, Eduard Serra
1The Molecular Sciences Institute, 2168 Shattuck Avenue, Berkeley, California 94704, USA. colman-lerner@molsci.org
Cell fate decisions in yeast reveal that cell-to-cell variability stems from signal transmission and protein production capacities, not just gene expression noise. These capacities are regulated by specific MAP kinases and show compensatory correlations.
Area of Science:
- Cell Biology
- Systems Biology
- Genetics
Background:
- Eukaryotic cell-fate decisions involve complex signaling pathways.
- Understanding cell-to-cell variability is crucial for deciphering biological robustness and diversity.
- The yeast mating pheromone response pathway serves as a model system for studying cell-fate decisions.
Purpose of the Study:
- To quantitatively analyze cell-to-cell variability in the yeast mating pheromone response pathway.
- To identify and measure the sources of variation in this eukaryotic cell-fate decision system.
- To investigate the regulatory mechanisms underlying pathway and expression capacities.
Main Methods:
- Analysis of thousands of individual, genetically identical yeast cells.
- Quantitative measurement of cell-to-cell variation in signaling pathway output.
- Dissection of contributions from gene expression noise, pathway capacity, and expression capacity.
Main Results:
- Cell-to-cell variation is primarily driven by differences in pathway capacity and expression capacity, not expression noise.
- High expression capacity correlates with faster protein production and increased cell volume.
- MAP kinases Fus3 and Kss1 differentially regulate pathway capacity variation based on pheromone levels.
- Pathway capacity and expression capacity are negatively correlated, indicating a compensatory mechanism.
Conclusions:
- Cellular response precision is influenced by both signal transmission and protein synthesis capabilities.
- Specific MAP kinases play key roles in modulating cell-specific responses within a population.
- A compensatory mechanism exists between pathway and expression capacities to enhance pheromone response accuracy.
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