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Related Experiment Videos

Web servicing the biological office.

Martin Szugat1, Daniel Güttler, Katrin Fundel

  • 1Department of Informatics, Ludwig-Maximilians-Universität München, München, Germany. prothesaurus@bio.ifi.lmu.de

Bioinformatics (Oxford, England)
|October 6, 2005
PubMed
Summary
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Biologists can now seamlessly access vital internet resources within Microsoft Office. A new Web service enriches standard applications, providing easy access to biological object information and database identifiers.

Area of Science:

  • * Bioinformatics and computational biology.
  • * Development of scientific software tools.

Background:

  • * Microsoft Office applications are standard tools for biologists.
  • * Essential internet-based biological information is often not readily accessible within these applications.
  • * Existing workflows require manual data retrieval, interrupting analysis.

Purpose of the Study:

  • * To develop a mechanism for integrating internet resources into Microsoft Office for biological data.
  • * To enhance standard analysis tasks by providing seamless access to biological information.
  • * To create a Web-based thesaurus for biological objects.

Main Methods:

  • * Implementation of a Web service architecture to connect MS Office with internet resources.
  • * Development of a biological object thesaurus mapping names to database identifiers and synonyms.

Related Experiment Videos

  • * Creation of a client application (ProTag) utilizing Smart Tags and Add-Ins for MS Office integration.

    • Main Results:

    • * Successful integration of a Web-based biological thesaurus into MS Office applications.
    • * ProTag enables direct access to biological object names, database identifiers, and synonyms.
    • * The mechanism is simple, extendable, and enhances data accessibility for biologists.

    Conclusions:

    • * Web services offer a viable solution for enriching standard software with specialized biological data.
    • * The ProTag application effectively bridges the gap between MS Office and essential online biological resources.
    • * This approach streamlines biological data analysis and information retrieval within familiar software environments.