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Published on: December 18, 2013
Counting cytokinesis proteins globally and locally in fission yeast
Jian-Qiu Wu1, Thomas D Pollard
1Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06520-8103, USA.
Abstract:
We used fluorescence microscopy to measure global and local concentrations of 28 cytoskeletal and signaling proteins fused to yellow fluorescent protein (YFP) in the fission yeast Schizosaccharomyces pombe. Native promoters controlled the expression of these functional YFP fusion proteins. Fluorescence measured by microscopy or flow cytometry was directly proportional to protein concentration measured by quantitative immunoblotting. Global cytoplasmic concentrations ranged from 0.04 (formin Cdc12p) to 63 micromolar (actin). Proteins concentrated up to 100 times in contractile rings and 7500 times in spindle pole bodies at certain times in the cell cycle. This approach can be used to measure the global and local concentrations of any fusion protein.
Insights
Researchers measured protein concentrations in fission yeast using yellow fluorescent protein (YFP) fusions. This microscopy method quantifies global and local protein levels, revealing significant cellular compartmentalization.
Area of Science:
- Cell biology
- Biophysics
- Molecular biology
Background:
- Understanding protein concentration is crucial for cell function.
- Previous methods had limitations in measuring global and local protein levels simultaneously.
Purpose of the Study:
- To develop and validate a method for measuring global and local protein concentrations in vivo.
- To quantify the concentrations of 28 cytoskeletal and signaling proteins in Schizosaccharomyces pombe.
Main Methods:
- Utilized fluorescence microscopy to measure yellow fluorescent protein (YFP) fusion protein concentrations.
- Employed native promoters for controlled expression of functional YFP fusion proteins.
- Validated fluorescence measurements against quantitative immunoblotting for protein concentration accuracy.
Main Results:
- Established a direct proportionality between fluorescence and protein concentration.
- Determined global cytoplasmic concentrations for 28 proteins, ranging from 0.04 to 63 micromolar.
- Observed significant protein enrichment (up to 7500-fold) in specific cellular compartments like contractile rings and spindle pole bodies during the cell cycle.
Conclusions:
- The developed fluorescence microscopy approach accurately measures global and local protein concentrations.
- Demonstrated substantial spatial and temporal regulation of protein abundance in fission yeast.
- This method is applicable for quantifying any fusion protein's concentration in vivo.
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