Counting cytokinesis proteins globally and locally in fission yeast

Jian-Qiu Wu1, Thomas D Pollard

  • 1Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06520-8103, USA.

Science (New York, N.Y.)
|October 15, 2005
PubMed

Insights

Researchers measured protein concentrations in fission yeast using yellow fluorescent protein (YFP) fusions. This microscopy method quantifies global and local protein levels, revealing significant cellular compartmentalization.

Area of Science:

  • Cell biology
  • Biophysics
  • Molecular biology

Background:

  • Understanding protein concentration is crucial for cell function.
  • Previous methods had limitations in measuring global and local protein levels simultaneously.

Purpose of the Study:

  • To develop and validate a method for measuring global and local protein concentrations in vivo.
  • To quantify the concentrations of 28 cytoskeletal and signaling proteins in Schizosaccharomyces pombe.

Main Methods:

  • Utilized fluorescence microscopy to measure yellow fluorescent protein (YFP) fusion protein concentrations.
  • Employed native promoters for controlled expression of functional YFP fusion proteins.
  • Validated fluorescence measurements against quantitative immunoblotting for protein concentration accuracy.

Main Results:

  • Established a direct proportionality between fluorescence and protein concentration.
  • Determined global cytoplasmic concentrations for 28 proteins, ranging from 0.04 to 63 micromolar.
  • Observed significant protein enrichment (up to 7500-fold) in specific cellular compartments like contractile rings and spindle pole bodies during the cell cycle.

Conclusions:

  • The developed fluorescence microscopy approach accurately measures global and local protein concentrations.
  • Demonstrated substantial spatial and temporal regulation of protein abundance in fission yeast.
  • This method is applicable for quantifying any fusion protein's concentration in vivo.

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