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Published on: February 23, 2024
Evolution of a rare vaccine-derived multirecombinant poliovirus
Ioannis Karakasiliotis1, Eleni Paximadi2, Panayotis Markoulatos2
1Department of Virology, Hellenic Pasteur Institute, 127 Vas. Sofias Avenue, 11521 Athens, Greece.
Abstract:
Recombination is one of the mechanisms by which viral genomes evolve. A vaccine-derived multirecombinant poliovirus strain was isolated from a 5-month-old child with vaccine-associated paralytic poliomyelitis after oral poliovirus vaccine administration. The isolate had an S2/S1/S2/S1 primary genomic structure as revealed by restriction fragment length polymorphism and sequencing analysis. Recombination of the middle S1/S2 region is extremely rare and one of the few characterized types of recombination with Sabin type 1 as a 5' partner. An attempt was made to perform evolutionary analysis of the contributing sequences using the identified mutations in comparison with the original Sabin sequences. A hypothesis is proposed for the order in which the identified recombination events occurred.
Insights
A rare poliovirus recombination event was identified in a child with vaccine-associated paralytic poliomyelitis. This study details the genomic structure and evolutionary analysis of this unusual viral strain.
Area of Science:
- Virology
- Molecular Biology
- Genetics
Background:
- Viral genome recombination is a key driver of viral evolution.
- Vaccine-derived poliovirus strains can undergo recombination.
- Vaccine-associated paralytic poliomyelitis (VAPP) is a rare complication of oral poliovirus vaccine (OPV) administration.
Purpose of the Study:
- To characterize a rare vaccine-derived poliovirus strain isolated from a VAPP case.
- To determine the genomic structure and recombination pattern of the poliovirus isolate.
- To perform evolutionary analysis of the identified recombination events.
Main Methods:
- Isolation and characterization of the poliovirus strain from a patient.
- Restriction fragment length polymorphism (RFLP) analysis to determine genomic structure.
- Sanger sequencing to confirm the primary genomic structure and identify mutations.
Main Results:
- A vaccine-derived poliovirus strain with an S2/S1/S2/S1 genomic structure was identified.
- The middle S1/S2 region recombination is a rare event, with Sabin type 1 as a 5' partner.
- Evolutionary analysis revealed mutations and proposed a hypothesis for the order of recombination events.
Conclusions:
- This study describes a rare poliovirus recombination event contributing to viral evolution.
- The findings enhance understanding of poliovirus genetic diversity and VAPP pathogenesis.
- Further research into rare recombination events is crucial for poliovirus eradication efforts.
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