A novel variant fibrinogen, deletion of Bbeta111Ser in coiled-coil region, affecting fibrin lateral aggregation

Nobuo Okumura1, Fumiko Terasawa, Masako Hirota-Kawadobora

  • 1Department of Biomedical Laboratory Sciences, School of Health Sciences, Shinshu University, Japan. nobuoku@gipac.shinshu-u.ac.jp

Insights

A novel fibrinogen variant, Kyoto IV (BbetaDelta111Ser), was identified in an infant with low functional fibrinogen. This variant shows altered polymerization, impacting fibrin clot formation under varying salt conditions.

Area of Science:

  • Hematology
  • Molecular Biology
  • Biochemistry

Background:

  • An infant presented with low functional fibrinogen concentration (<0.50 g/l), suggesting dysfibrinogenemia or hypofibrinogenemia.
  • Fibrinogen is a critical protein for blood clot formation.

Observation:

  • Identified a novel heterozygous fibrinogen variant, Kyoto IV, resulting from a 3-bp deletion in the Bbeta-chain gene, specifically deleting Serine at position 111 (BbetaDelta111Ser) within the coiled-coil region.
  • Observed discrepancies in functional fibrinogen determinations across different reagents and analyzers, attributed to variations in NaCl concentration.

Findings:

  • Kyoto IV fibrinogen demonstrated augmented polymerization under normal physiological conditions compared to normal fibrinogen.
  • Under 0.21 mol/l NaCl conditions, Kyoto IV fibrinogen exhibited significantly impaired polymerization compared to normal controls, indicating altered salt sensitivity.
  • The Bbeta111Ser residue in the coiled-coil region plays a crucial role in fibrin lateral aggregation.

Implications:

  • The BbetaDelta111Ser variant contributes to altered fibrin polymerization dynamics.
  • Understanding the role of the coiled-coil region in fibrinogen is vital for diagnosing and managing dysfibrinogenemia.
  • This finding advances knowledge of fibrinogen structure-function relationships and their impact on hemostasis.
Abstract

Related Concept Videos

Amyloid Fibrils03:03

Amyloid Fibrils

Amyloid fibrils are aggregates of misfolded proteins.  Under most circumstances, misfolded proteins are either refolded by chaperone proteins or degraded by the proteasome. However, in the case of a mutation or a disease, these proteins can accumulate to form large clusters and often further assemble to form elongated fibers, called fibrils. 
Amyloid deposits were observed as early as 1639 in the liver and the spleen.   In 1854, Rudolph Virchow performed iodine staining, normally used to...
Amyloid Fibrils03:03

Amyloid Fibrils

Amyloid fibrils are aggregates of misfolded proteins.  Under most circumstances, misfolded proteins are either refolded by chaperone proteins or degraded by the proteasome. However, in the case of a mutation or a disease, these proteins can accumulate to form large clusters and often further assemble to form elongated fibers, called fibrils. 
Amyloid deposits were observed as early as 1639 in the liver and the spleen.   In 1854, Rudolph Virchow performed iodine staining, normally used to...
Fibril-associated Collagen01:11

Fibril-associated Collagen

Fibril-associated collagens are a type of collagens present in the extracellular matrix with interrupted triple helices or FACIT (Fibril-associated collagens interrupted triple-helices). FACIT help connect and attach the collagen fibrils with each other as well as with other proteins of the extracellular matrix.
For example, the type II collagen fibrils in cartilage have covalently bound type IX fibril-associated collagens at regular intervals. Other types of fibril-associated collagens are...
Type IV Collagen of Basal Lamina01:05

Type IV Collagen of Basal Lamina

Type IV collagen is a 400 nm long, network-forming collagen that acts as a barrier between the epithelial and endothelial cells. Type IV collagen  forms the backbone of the basement membrane by scaffolding with laminin, entactin, proteoglycans, and fibronectin. Apart from rendering structural support to the basement membrane, it also helps entail signaling potentials necessary for both pathological and physiological functions.
A type IV collagen molecule has six alpha chains which can exist in...
Protein Folding01:22

Protein Folding

Overview
Protein Folding01:25

Protein Folding

Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...