Transcriptomic profiling of the canine tachycardia-induced heart failure model: global comparison to human and murine

Zhong Gao1, Hai Xu, Deborah DiSilvestre

  • 1Center for Cardiovascular Bioinformatics and Modeling, The Johns Hopkins University School of Medicine and Whiting School of Engineering, Baltimore, MD 21218, USA.

Insights

Canine tachycardia pacing models reveal shared and distinct gene expression changes in heart failure (HF) ventricles. This study compares canine HF transcriptomes to human and mouse models, offering insights into HF molecular pathways.

Area of Science:

  • Cardiovascular Biology
  • Molecular Genetics
  • Comparative Pathology

Background:

  • Cardiac gene expression alterations are fundamental to ventricular dysfunction in human heart failure (HF).
  • The canine tachycardia pacing model effectively replicates key hemodynamic, echocardiographic, and electrophysiological changes seen in human HF.
  • Understanding transcriptomic differences across species is crucial for developing effective HF therapies.

Purpose of the Study:

  • To compare gene expression profiles in the left and right ventricles (LV, RV) of normal and end-stage failing canine hearts.
  • To compare canine HF transcriptomic profiles with those from human and murine HF models.
  • To elucidate molecular pathways underlying end-stage tachycardia-induced HF and interspecies transcriptomic variations.

Main Methods:

  • Utilized a canine tachycardia pacing-induced heart failure model.
  • Performed comparative transcriptomic analysis of left and right ventricles in normal and failing canine hearts.
  • Compared canine HF gene expression data with existing human and murine HF datasets.

Main Results:

  • In end-stage HF, the canine LV showed downregulation of genes involved in energy production, cardiac contraction, and excitation-contraction coupling.
  • Most transcriptomic changes in canine HF were conserved between the LV and RV.
  • Genes uniquely downregulated in the canine LV were associated with aerobic energy production, actin regulation, and receptor signaling.
  • Interventricular differences in gene expression were observed in failing canine hearts, involving transcription factors like MEF2, MITF, and ATF4.
  • Human HF involves broad gene downregulation, while experimental HF models primarily show energy pathway downregulation; human ischemic HF and canine HF share upregulated pathway similarities.

Conclusions:

  • The canine tachycardia pacing model provides valuable insights into the molecular mechanisms of heart failure.
  • Significant transcriptomic similarities and differences exist between canine, human, and murine HF models.
  • Comparative transcriptomics can identify conserved and species-specific molecular pathways in heart failure, guiding therapeutic strategies.

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