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Updated: Aug 15, 2026

Measuring Phagosome pH by Ratiometric Fluorescence Microscopy
Published on: December 7, 2015
Visualization of vacuolar acidification-induced transcription of genes of pathogens inside macrophages
Natalia Martin-Orozco1, Nicolas Touret, Michael L Zaharik
1Cell Biology Program, Hospital for Sick Children and Department of Biochemistry, University of Toronto, Toronto, Ontario M5G 1X8, Canada.
Abstract:
The objective of these studies was to analyze the role of the ionic environment of phagosomal vacuoles in the control of pathogens by macrophages. Digital imaging and flow cytometry were used to follow the induction of the phoP promoter of Salmonella enterica Typhimurium within live macrophages. Manipulating the Mg2+ concentration within the Salmonella-containing vacuole (SCV) was without effect on the early induction of PhoPQ. Moreover, direct measurement of [Mg2+] within the SCV using nanosensor particles showed that, during this initial period of phoP activation, the concentration of the divalent cation is rapidly regulated and stabilizes around 1 mm. Extrusion of other divalent cations via the Nramp1 efflux pump was similarly ruled out as an important contributor to the activation of the regulon. By contrast, induction of PhoP was greatly attenuated when the pH gradient across the SCV membrane was dissipated. A second, more modest pH-independent component of PhoP induction was unmasked by inhibition of the vacuolar proton pump. This second component was eliminated by pretreatment of cells with IFNgamma, even though the cytokine augmented the overall PhoP response. These findings demonstrate the existence of at least three separate activators of phoP transcription: resting and IFNgamma-stimulated pH-sensitive components, plus a pH-independent component.
Insights
Macrophages control pathogens by regulating the phagosomal environment. This study reveals pH and IFN-gamma signaling as key activators of Salmonella PhoP transcription, independent of magnesium levels.
Area of Science:
- Immunology
- Microbiology
- Cell Biology
Background:
- Macrophages are crucial in host defense against intracellular pathogens like Salmonella.
- The phagosome's ionic environment plays a role in pathogen control.
- The PhoPQ regulon in Salmonella is essential for virulence and adaptation within host cells.
Purpose of the Study:
- To investigate the influence of the phagosomal ionic milieu on macrophage-mediated pathogen control.
- To elucidate the specific environmental factors within the Salmonella-containing vacuole (SCV) that regulate PhoP transcription.
Main Methods:
- Utilized digital imaging and flow cytometry to monitor Salmonella enterica Typhimurium phoP promoter activity in live macrophages.
- Employed nanosensor particles for direct measurement of magnesium ion concentration ([Mg2+]) within the SCV.
- Investigated the impact of altering SCV pH gradients and inhibiting vacuolar proton pumps on PhoP induction.
- Assessed the effect of interferon-gamma (IFN-γ) pretreatment on PhoP activation.
Main Results:
- Early induction of PhoP was unaffected by manipulating Mg2+ levels within the SCV; [Mg2+] was rapidly stabilized around 1 mM.
- Nramp1 efflux pump activity did not significantly contribute to PhoP regulon activation.
- Dissipating the SCV pH gradient significantly attenuated PhoP induction.
- A pH-independent component of PhoP induction was revealed upon vacuolar proton pump inhibition.
- IFN-γ pretreatment eliminated the pH-independent component but enhanced the overall PhoP response.
Conclusions:
- PhoP transcription is regulated by at least three distinct activators: a pH-sensitive component in resting macrophages, an IFN-γ-stimulated pH-sensitive component, and a pH-independent component.
- The phagosomal pH gradient is a critical factor for PhoP activation, while Mg2+ concentration plays a limited role in early induction.
- IFN-γ modulates PhoP induction through distinct pathways, highlighting complex immune signaling.
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